The structure of the UdgX mutant H109E crosslinked to single-stranded DNA

2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31.

Structural insights into an MsmUdgX mutant capable of both crosslinking and uracil excision capability.

Phage SPO1 DNA polymerase-related protein

DNA (5'-D(P*TP*GP*(ORP)P*AP*GP*GP*CP*AP*TP*GP*C)-3')

GSHMAGAQDFVPHTADLAELAAAAGECRGCGLYRDATQAVFGAGGRSARIMMIGEQPGDKEDLAGLPFVGPAGRLLDRAL
EAADIDRDALYVTNAVKHFKFTRAAGGKRRIEKTPSRTEVVACRPWLIAEMTSVEPDVVVLLGATAAKALLGNDFRVTQH
RGEVLHVDDVPGDPALVATVHPSSLLRGPKEERESAFAGLVDDLRVAADVRP

2.15 M sodium malonate pH 7.0 and 3.8% MPD

National Natural Science Foundation of China

AUTHORS STATE THAT THE GENEBANK ACCESSION NUMBER IS AWT51284.1. FOR THE PROTEIN.

chain 'A' and (resid 3 through 79 )

chain 'A' and (resid 80 through 101 )

chain 'A' and (resid 102 through 113 )

chain 'A' and (resid 114 through 157 )

chain 'A' and (resid 158 through 186 )

chain 'A' and (resid 187 through 209 )

chain 'B' and (resid 12 through 79 )

chain 'B' and (resid 80 through 96 )

chain 'B' and (resid 97 through 207 )

chain 'C' and (resid 6 through 16 )

chain 'D' and (resid 6 through 16 )

UdgX, covalent complex, protein-DNA interaction, DNA repair, glycosylase, DNA BINDING PROTEIN

(chain A and (resseq 12:13 or (resid 14 and (name N or name CA or name CB or name CG or name CD1 or name CD2)) or resseq 15 or (resid 16 and (name N or name CA or name CB or name C or name O )) or resseq 17:22 or (resid 23 and (name N or name CA or name CB or name C or name O )) or resseq 24 or (resid 25 and (name N or name CA or name CB or name C or name O )) or resseq 26:28 or (resid 29 and (name N or name CA or name CB or name CG or name CD1 or name CD2)) or (resid 30 and (name N or name CA or name CB or name C or name O )) or (resid 31 and (name N or name CA or name C or name O )) or resseq 32 or (resid 33 and (name N or name CA or name CB )) or (resid 34 and (name N or name CA or name CB or name OG1 or name CG2)) or resseq 35:42 or (resid 43 and (name N or name CA or name CB or name CG or name CD or name NE or name CZ or name NH1 or name NH2)) or resseq 44:45 or (resid 46 and (name N or name CA or name CB or name C or name O )) or resseq 47:83 or (resid 84 and (name N or name CA or name CB or name C or name O )) or resseq 85:96 or (resid 97 and (name N or name CA or name CB or name CG or name CD or name CE or name NZ )) or resseq 98:99 or (resid 100 and (name N or name CA or name C or name O )) or (resid 106 and (name N or name CA or name C or name O )) or (resid 107 and (name N or name CA or name CB or name CG or name CD or name NE or name CZ or name NH1 or name NH2)) or (resid 108 and (name N or name CA or name CB or name CG1 or name CD1)) or resseq 109 or (resid 110 and (name N or name CA or name CB or name C or name O )) or resseq 111:113 or (resid 115 and (name N or name CA or name CB or name C or name O )) or resseq 116:121 or (resid 122 and (name N or name CA or name CB or name C or name O )) or resseq 123:124 or (resid 125 and (name N or name CA or name CB or name C or name O )) or resseq 126:131 or (resid 132 and (name N or name CA or name CB or name CG or name CD or name OE1 or name OE2)) or resseq 133:147 or (resid 148 and (name N or name CA or name CB or name C or name O )) or resseq 149:150 or (resid 151 and (name N or name CA or name CB or name C or name O )) or resseq 152 or resseq 154:155 or resseq 157:163 or (resid 164 and (name N or name CA or name C or name O )) or (resid 165 and (name N or name CA or name C or name O )) or (resid 166 and (name N or name CA or name C or name O )) or (resid 167 and (name N or name CA or name CB or name C or name O )) or resseq 168:169 or (resid 170 and (name N or name CA or name CB or name CG or name OD1 or name OD2)) or resseq 171:189 or (resid 190 and (name N or name CA or name CB or name CG or name CD or name NE or name CZ or name NH1 or name NH2)) or (resid 191 and (name N or name CA or name CB or name CG or name CD or name OE1 or name OE2)) or resseq 192:201 or resseq 203:205 or (resid 206 and (name N or name CA or name CB or name C or name O )) or (resid 207 and (name N or name CA or name C or name O ))))

(chain B and (resseq 12:13 or (resid 14 and (name N or name CA or name CB or name CG or name CD1 or name CD2)) or resseq 15:28 or (resid 29 and (name N or name CA or name CB or name CG or name CD1 or name CD2)) or resseq 30 or (resid 31 and (name N or name CA or name C or name O )) or resseq 32 or (resid 33 and (name O or name N or name C )) or (resid 34 and (name N or name CA or name CB or name OG1 or name CG2)) or resseq 35:42 or (resid 43 and (name N or name CA or name CB or name CG or name CD or name NE or name CZ or name NH1 or name NH2)) or resseq 44:84 or (resid 85 and (name N or name CA or name CB or name C or name O )) or resseq 86:96 or (resid 97 and (name N or name CA or name CB or name CG or name CD or name CE or name NZ )) or resseq 98:99 or (resid 100 and (name N or name CA or name C or name O )) or (resid 106 and (name N or name CA or name C or name O )) or (resid 107 and (name N or name CA or name CB or name CG or name CD or name NE or name CZ or name NH1 or name NH2)) or (resid 108 and (name N or name CA or name CB or name CG1 or name CD1)) or resseq 109:113 or resseq 115:131 or (resid 132 and (name N or name CA or name CB or name CG or name CD or name OE1 or name OE2)) or resseq 133:152 or resseq 154:155 or resseq 157:163 or (resid 164 and (name N or name CA or name C or name O )) or (resid 165 and (name N or name CA or name C or name O )) or (resid 166 and (name N or name CA or name C or name O )) or resseq 167:169 or (resid 170 and (name N or name CA or name CB or name CG or name OD1 or name OD2)) or resseq 171:187 or (resid 188 and (name N or name CA or name CB or name C or name O )) or (resid 189 and (name N or name CA or name CB or name C or name O )) or (resid 190 and (name N or name CA or name CB or name CG or name CD or name NE or name CZ or name NH1 or name NH2)) or (resid 191 and (name N or name CA or name CB or name CG or name CD or name OE1 or name OE2)) or resseq 192:201 or resseq 203:206 or (resid 207 and (name N or name CA or name C or name O ))))

MAGAQDFVPHTADLAELAAAAGECRGCGLYRDATQAVFGAGGRSARIMMIGEQPGDKEDLAGLPFVGPAGRLLDRALEAA
DIDRDALYVTNAVKHFKFTRAAGGKRRIHKTPSRTEVVACRPWLIAEMTSVEPDVVVLLGATAAKALLGNDFRVTQHRGE
VLHVDDVPGDPALVATVHPSSLLRGPKEERESAFAGLVDDLRVAADVRP

binding site for Poly-Saccharide residues DG C 7 through GLU A 109

binding site for Di-Saccharide ORP C 8 and DA C 9

binding site for Poly-Saccharide residues DG D 7 through GLU B 109

binding site for Di-Saccharide ORP D 8 and DA D 9