Crystal structure of the lasso peptide Sphingopyxin I (SpI)
type: datablock
alternative label: 5JQF
link to mmcif: 5JQF.cif.gz
link to pdbml: 5JQF.xml.gz
link to pdbml noatom: 5JQF-noatom.xml.gz
link to pdbml extatom: 5JQF-extatom.xml.gz
link to doi: doi:10.2210/pdb5JQF/pdb
datablock name: 5JQF-noatom
has atom sites category: atom sitesCategory
has atom type category: atom typeCategory
has audit author category: audit authorCategory
has audit conform category: audit conformCategory
has cell category: cellCategory
has chem comp category: chem compCategory
has citation category: citationCategory
has citation author category: citation authorCategory
has database 2 category: database 2Category
has diffrn category: diffrnCategory
has diffrn detector category: diffrn detectorCategory
has diffrn radiation category: diffrn radiationCategory
has diffrn radiation wavelength category: diffrn radiation wavelengthCategory
has diffrn source category: diffrn sourceCategory
has entity category: entityCategory
has entity poly category: entity polyCategory
has entity poly seq category: entity poly seqCategory
has entity src gen category: entity src genCategory
has entry category: entryCategory
has exptl category: exptlCategory
has exptl crystal category: exptl crystalCategory
has exptl crystal grow category: exptl crystal growCategory
has pdbx audit revision category category: pdbx audit revision categoryCategory
has pdbx audit revision details category: pdbx audit revision detailsCategory
has pdbx audit revision group category: pdbx audit revision groupCategory
has pdbx audit revision history category: pdbx audit revision historyCategory
has pdbx audit revision item category: pdbx audit revision itemCategory
has pdbx audit support category: pdbx audit supportCategory
has pdbx database related category: pdbx database relatedCategory
has pdbx database status category: pdbx database statusCategory
has pdbx entity nonpoly category: pdbx entity nonpolyCategory
has pdbx nonpoly scheme category: pdbx nonpoly schemeCategory
has pdbx poly seq scheme category: pdbx poly seq schemeCategory
has pdbx struct assembly category: pdbx struct assemblyCategory
has pdbx struct assembly gen category: pdbx struct assembly genCategory
has pdbx struct oper list category: pdbx struct oper listCategory
has pdbx struct sheet hbond category: pdbx struct sheet hbondCategory
has pdbx validate torsion category: pdbx validate torsionCategory
has refine category: refineCategory
has refine hist category: refine histCategory
has refine ls restr category: refine ls restrCategory
has refine ls restr ncs category: refine ls restr ncsCategory
has refine ls shell category: refine ls shellCategory
has reflns category: reflnsCategory
has reflns shell category: reflns shellCategory
has software category: softwareCategory
has struct category: structCategory
has struct asym category: struct asymCategory
has struct conn category: struct connCategory
has struct conn type category: struct conn typeCategory
has struct keywords category: struct keywordsCategory
has struct ncs dom category: struct ncs domCategory
has struct ncs dom lim category: struct ncs dom limCategory
has struct ncs ens category: struct ncs ensCategory
has struct ref category: struct refCategory
has struct ref seq category: struct ref seqCategory
has struct sheet category: struct sheetCategory
has struct sheet order category: struct sheet orderCategory
has struct sheet range category: struct sheet rangeCategory
has symmetry category: symmetryCategory

5JQF
type: atom sites
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entry: 5JQF
atom sites.entry id: 5JQF
atom sites.fract transf matrix11: 0.025484
atom sites.fract transf matrix12: 0.014713
atom sites.fract transf matrix13: 0
atom sites.fract transf matrix21: 0
atom sites.fract transf matrix22: 0.029427
atom sites.fract transf matrix23: 0
atom sites.fract transf matrix31: 0
atom sites.fract transf matrix32: 0
atom sites.fract transf matrix33: 0.031837
atom sites.fract transf vector1: 0
atom sites.fract transf vector2: 0
atom sites.fract transf vector3: 0

5JQF
referenced by atom sites: 5JQF
referenced by cell: 5JQF
type: entry
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
entry.id: 5JQF
referenced by exptl: 5JQF,X-RAY DIFFRACTION
referenced by refine: 5JQF,X-RAY DIFFRACTION
referenced by reflns: http://rdf.wwpdb.org/pdb/5JQF/reflns/1
referenced by struct: 5JQF
referenced by struct keywords: 5JQF
referenced by symmetry: 5JQF
referenced by pdbx database status: 5JQF

http://rdf.wwpdb.org/pdb/5JQF/atom_type/C
type: atom type
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
atom type.symbol: C

http://rdf.wwpdb.org/pdb/5JQF/atom_type/H
type: atom type
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
atom type.symbol: H

http://rdf.wwpdb.org/pdb/5JQF/atom_type/N
type: atom type
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
atom type.symbol: N

http://rdf.wwpdb.org/pdb/5JQF/atom_type/O
type: atom type
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
atom type.symbol: O

http://rdf.wwpdb.org/pdb/5JQF/audit_author/1
type: audit author
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
audit author.pdbx ordinal: 1
audit author.name: Fage, C.D.

http://rdf.wwpdb.org/pdb/5JQF/audit_author/2
type: audit author
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
audit author.pdbx ordinal: 2
audit author.name: Hegemann, J.D.

http://rdf.wwpdb.org/pdb/5JQF/audit_author/3
type: audit author
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
audit author.pdbx ordinal: 3
audit author.name: Harms, K.

http://rdf.wwpdb.org/pdb/5JQF/audit_author/4
type: audit author
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
audit author.pdbx ordinal: 4
audit author.name: Bange, G.

http://rdf.wwpdb.org/pdb/5JQF/audit_author/5
type: audit author
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
audit author.pdbx ordinal: 5
audit author.name: Marahiel, M.A.

mmcif pdbx.dic,5.343
type: audit conform
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
audit conform.dict name: mmcif_pdbx.dic
audit conform.dict version: 5.343
audit conform.dict location: http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic

5JQF
type: cell
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entry: 5JQF
cell.entry id: 5JQF
cell.z PDB: 12
cell.angle alpha: 90
cell.angle beta: 90
cell.angle gamma: 120
cell.length a: 39.24
cell.length b: 39.24
cell.length c: 31.41

ALA
type: chem comp
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
chem comp.id: ALA
chem comp.formula: C3 H7 N O2
chem comp.formula weight: 89.093
chem comp.mon nstd flag: y
chem comp.name: ALANINE
chem comp.type: L-peptide linking
link to chem comp: ALA
referenced by entity poly seq: 1,ALA,19

ASP
type: chem comp
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
chem comp.id: ASP
chem comp.formula: C4 H7 N O4
chem comp.formula weight: 133.103
chem comp.mon nstd flag: y
chem comp.name: ASPARTIC ACID
chem comp.type: L-peptide linking
link to chem comp: ASP
referenced by entity poly seq: 1,ASP,11
referenced by entity poly seq: 1,ASP,9

GLN
type: chem comp
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
chem comp.id: GLN
chem comp.formula: C5 H10 N2 O3
chem comp.formula weight: 146.144
chem comp.mon nstd flag: y
chem comp.name: GLUTAMINE
chem comp.type: L-peptide linking
link to chem comp: GLN
referenced by entity poly seq: 1,GLN,12

GLU
type: chem comp
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
chem comp.id: GLU
chem comp.formula: C5 H9 N O4
chem comp.formula weight: 147.129
chem comp.mon nstd flag: y
chem comp.name: GLUTAMIC ACID
chem comp.type: L-peptide linking
link to chem comp: GLU
referenced by entity poly seq: 1,GLU,14
referenced by entity poly seq: 1,GLU,3
referenced by entity poly seq: 1,GLU,10

GLY
type: chem comp
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
chem comp.id: GLY
chem comp.formula: C2 H5 N O2
chem comp.formula weight: 75.067
chem comp.mon nstd flag: y
chem comp.name: GLYCINE
chem comp.type: peptide linking
link to chem comp: GLY
referenced by entity poly seq: 1,GLY,21
referenced by entity poly seq: 1,GLY,1
referenced by entity poly seq: 1,GLY,6
referenced by entity poly seq: 1,GLY,13
referenced by entity poly seq: 1,GLY,20

HIS
type: chem comp
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
chem comp.id: HIS
chem comp.formula: C6 H10 N3 O2 1
chem comp.formula weight: 156.162
chem comp.mon nstd flag: y
chem comp.name: HISTIDINE
chem comp.type: L-peptide linking
link to chem comp: HIS
referenced by entity poly seq: 1,HIS,15

HOH
type: chem comp
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
chem comp.id: HOH
chem comp.formula: H2 O
chem comp.formula weight: 18.015
chem comp.name: WATER
chem comp.type: non-polymer
link to chem comp: HOH

ILE
type: chem comp
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
chem comp.id: ILE
chem comp.formula: C6 H13 N O2
chem comp.formula weight: 131.173
chem comp.mon nstd flag: y
chem comp.name: ISOLEUCINE
chem comp.type: L-peptide linking
link to chem comp: ILE
referenced by entity poly seq: 1,ILE,2

LEU
type: chem comp
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
chem comp.id: LEU
chem comp.formula: C6 H13 N O2
chem comp.formula weight: 131.173
chem comp.mon nstd flag: y
chem comp.name: LEUCINE
chem comp.type: L-peptide linking
link to chem comp: LEU
referenced by entity poly seq: 1,LEU,17
referenced by entity poly seq: 1,LEU,5

PHE
type: chem comp
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
chem comp.id: PHE
chem comp.formula: C9 H11 N O2
chem comp.formula weight: 165.189
chem comp.mon nstd flag: y
chem comp.name: PHENYLALANINE
chem comp.type: L-peptide linking
link to chem comp: PHE
referenced by entity poly seq: 1,PHE,18

PRO
type: chem comp
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
chem comp.id: PRO
chem comp.formula: C5 H9 N O2
chem comp.formula weight: 115.13
chem comp.mon nstd flag: y
chem comp.name: PROLINE
chem comp.type: L-peptide linking
link to chem comp: PRO
referenced by entity poly seq: 1,PRO,7
referenced by entity poly seq: 1,PRO,4

TYR
type: chem comp
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
chem comp.id: TYR
chem comp.formula: C9 H11 N O3
chem comp.formula weight: 181.189
chem comp.mon nstd flag: y
chem comp.name: TYROSINE
chem comp.type: L-peptide linking
link to chem comp: TYR
referenced by entity poly seq: 1,TYR,16

VAL
type: chem comp
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
chem comp.id: VAL
chem comp.formula: C5 H11 N O2
chem comp.formula weight: 117.146
chem comp.mon nstd flag: y
chem comp.name: VALINE
chem comp.type: L-peptide linking
link to chem comp: VAL
referenced by entity poly seq: 1,VAL,8

primary
type: citation
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
citation.id: primary
citation.country: GE
citation.journal abbrev: Angew. Chem. Int. Ed. Engl.
citation.journal id ASTM: ACIEAY
citation.journal id CSD: 0179
citation.journal id ISSN: 1521-3773
citation.journal volume: 55
citation.page first: 12717
citation.page last: 12721
citation.pdbx database id DOI: 10.1002/anie.201605232
citation.pdbx database id pub med: 27611791
citation.title: Structure and Mechanism of the Sphingopyxin I Lasso Peptide Isopeptidase.
citation.year: 2016
link to doi: doi:10.1002/anie.201605232
link to pubmed: pubmed:27611791
references: pubmed:27611791
referenced by citation author: primary,Marahiel, M.A.,9
referenced by citation author: primary,Fage, C.D.,1
referenced by citation author: primary,Hegemann, J.D.,2
referenced by citation author: primary,Nebel, A.J.,3
referenced by citation author: primary,Steinbach, R.M.,4
referenced by citation author: primary,Zhu, S.,5
referenced by citation author: primary,Linne, U.,6
referenced by citation author: primary,Harms, K.,7
referenced by citation author: primary,Bange, G.,8

primary,Fage, C.D.,1
type: citation author
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to citation: primary
citation author.citation id: primary
citation author.name: Fage, C.D.
citation author.ordinal: 1

primary,Hegemann, J.D.,2
type: citation author
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to citation: primary
citation author.citation id: primary
citation author.name: Hegemann, J.D.
citation author.ordinal: 2

primary,Nebel, A.J.,3
type: citation author
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to citation: primary
citation author.citation id: primary
citation author.name: Nebel, A.J.
citation author.ordinal: 3

primary,Steinbach, R.M.,4
type: citation author
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to citation: primary
citation author.citation id: primary
citation author.name: Steinbach, R.M.
citation author.ordinal: 4

primary,Zhu, S.,5
type: citation author
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to citation: primary
citation author.citation id: primary
citation author.name: Zhu, S.
citation author.ordinal: 5

primary,Linne, U.,6
type: citation author
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to citation: primary
citation author.citation id: primary
citation author.name: Linne, U.
citation author.ordinal: 6

primary,Harms, K.,7
type: citation author
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to citation: primary
citation author.citation id: primary
citation author.name: Harms, K.
citation author.ordinal: 7

primary,Bange, G.,8
type: citation author
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to citation: primary
citation author.citation id: primary
citation author.name: Bange, G.
citation author.ordinal: 8

primary,Marahiel, M.A.,9
type: citation author
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to citation: primary
citation author.citation id: primary
citation author.name: Marahiel, M.A.
citation author.ordinal: 9

5JQF,PDB
type: database 2
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
database 2.database code: 5JQF
database 2.database id: PDB

D 1000221060,WWPDB
type: database 2
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
database 2.database code: D_1000221060
database 2.database id: WWPDB

http://rdf.wwpdb.org/pdb/5JQF/diffrn/1
type: diffrn
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to exptl crystal: http://rdf.wwpdb.org/pdb/5JQF/exptl_crystal/1
diffrn.id: 1
diffrn.ambient temp: 100
diffrn.crystal id: 1
referenced by diffrn detector: http://rdf.wwpdb.org/pdb/5JQF/diffrn_detector/1
referenced by diffrn radiation: http://rdf.wwpdb.org/pdb/5JQF/diffrn_radiation/1
referenced by diffrn source: http://rdf.wwpdb.org/pdb/5JQF/diffrn_source/1

http://rdf.wwpdb.org/pdb/5JQF/exptl_crystal/1
referenced by diffrn: http://rdf.wwpdb.org/pdb/5JQF/diffrn/1
type: exptl crystal
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
exptl crystal.id: 1
exptl crystal.density matthews: 1.59
exptl crystal.density percent sol: 22.43
exptl crystal.description: Needle-like
referenced by exptl crystal grow: http://rdf.wwpdb.org/pdb/5JQF/exptl_crystal_grow/1

http://rdf.wwpdb.org/pdb/5JQF/diffrn_detector/1
type: diffrn detector
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to diffrn: http://rdf.wwpdb.org/pdb/5JQF/diffrn/1
diffrn detector.diffrn id: 1
diffrn detector.detector: PIXEL
diffrn detector.pdbx collection date: 2016-04-15
diffrn detector.type: DECTRIS PILATUS 6M-F

http://rdf.wwpdb.org/pdb/5JQF/diffrn_radiation/1
type: diffrn radiation
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to diffrn: http://rdf.wwpdb.org/pdb/5JQF/diffrn/1
diffrn radiation.diffrn id: 1
diffrn radiation.monochromator: Si (111)
diffrn radiation.pdbx diffrn protocol: SINGLE WAVELENGTH
diffrn radiation.pdbx monochromatic or laue m l: M
diffrn radiation.pdbx scattering type: x-ray
diffrn radiation.wavelength id: 1

http://rdf.wwpdb.org/pdb/5JQF/diffrn_radiation_wavelength/1
type: diffrn radiation wavelength
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
diffrn radiation wavelength.id: 1
diffrn radiation wavelength.wavelength: 0.82656
diffrn radiation wavelength.wt: 1

http://rdf.wwpdb.org/pdb/5JQF/diffrn_source/1
type: diffrn source
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to diffrn: http://rdf.wwpdb.org/pdb/5JQF/diffrn/1
diffrn source.diffrn id: 1
diffrn source.pdbx synchrotron beamline: ID23-1
diffrn source.pdbx synchrotron site: ESRF
diffrn source.pdbx wavelength list: 0.82656
diffrn source.source: SYNCHROTRON
diffrn source.type: ESRF BEAMLINE ID23-1

http://rdf.wwpdb.org/pdb/5JQF/entity/1
type: entity
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
entity.id: 1
entity.details: An isopeptide bond exists between the N-terminus of Gly1 and side chain of Asp9
entity.formula weight: 2201.326
entity.pdbx description: Sphingopyxin I
entity.pdbx number of molecules: 2
entity.src method: man
entity.type: polymer
referenced by entity poly: http://rdf.wwpdb.org/pdb/5JQF/entity_poly/1
referenced by struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/B
referenced by struct ref: http://rdf.wwpdb.org/pdb/5JQF/struct_ref/1
referenced by entity src gen: 1,1
referenced by struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/A

http://rdf.wwpdb.org/pdb/5JQF/entity/2
type: entity
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
entity.id: 2
entity.formula weight: 18.015
entity.pdbx description: water
entity.pdbx number of molecules: 35
entity.src method: nat
entity.type: water
referenced by struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/D
referenced by pdbx entity nonpoly: http://rdf.wwpdb.org/pdb/5JQF/pdbx_entity_nonpoly/2
referenced by struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/C

http://rdf.wwpdb.org/pdb/5JQF/entity_poly/1
type: entity poly
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity: http://rdf.wwpdb.org/pdb/5JQF/entity/1
entity poly.entity id: 1
entity poly.nstd linkage: no
entity poly.nstd monomer: no
entity poly.pdbx seq one letter code: GIEPLGPVDEDQGEHYLFAGG
entity poly.pdbx seq one letter code can: GIEPLGPVDEDQGEHYLFAGG
entity poly.pdbx strand id: A,B
entity poly.type: polypeptide(L)
referenced by entity poly seq: 1,GLY,21
referenced by entity poly seq: 1,GLY,1
referenced by entity poly seq: 1,ILE,2
referenced by entity poly seq: 1,GLU,3
referenced by entity poly seq: 1,PRO,4
referenced by entity poly seq: 1,LEU,5
referenced by entity poly seq: 1,GLY,6
referenced by entity poly seq: 1,PRO,7
referenced by entity poly seq: 1,VAL,8
referenced by entity poly seq: 1,ASP,9
referenced by entity poly seq: 1,GLU,10
referenced by entity poly seq: 1,ASP,11
referenced by entity poly seq: 1,GLN,12
referenced by entity poly seq: 1,GLY,13
referenced by entity poly seq: 1,GLU,14
referenced by entity poly seq: 1,HIS,15
referenced by entity poly seq: 1,TYR,16
referenced by entity poly seq: 1,LEU,17
referenced by entity poly seq: 1,PHE,18
referenced by entity poly seq: 1,ALA,19
referenced by entity poly seq: 1,GLY,20

1,GLY,1
type: entity poly seq
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to chem comp: GLY
reference to entity poly: http://rdf.wwpdb.org/pdb/5JQF/entity_poly/1
entity poly seq.entity id: 1
entity poly seq.mon id: GLY
entity poly seq.num: 1
entity poly seq.hetero: n
referenced by pdbx poly seq scheme: B,1,GLY,1
referenced by pdbx poly seq scheme: A,1,GLY,1

1,ILE,2
type: entity poly seq
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to chem comp: ILE
reference to entity poly: http://rdf.wwpdb.org/pdb/5JQF/entity_poly/1
entity poly seq.entity id: 1
entity poly seq.mon id: ILE
entity poly seq.num: 2
entity poly seq.hetero: n
referenced by pdbx poly seq scheme: B,1,ILE,2
referenced by pdbx poly seq scheme: A,1,ILE,2

1,GLU,3
type: entity poly seq
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to chem comp: GLU
reference to entity poly: http://rdf.wwpdb.org/pdb/5JQF/entity_poly/1
entity poly seq.entity id: 1
entity poly seq.mon id: GLU
entity poly seq.num: 3
entity poly seq.hetero: n
referenced by pdbx poly seq scheme: B,1,GLU,3
referenced by pdbx poly seq scheme: A,1,GLU,3

1,PRO,4
type: entity poly seq
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to chem comp: PRO
reference to entity poly: http://rdf.wwpdb.org/pdb/5JQF/entity_poly/1
entity poly seq.entity id: 1
entity poly seq.mon id: PRO
entity poly seq.num: 4
entity poly seq.hetero: n
referenced by pdbx poly seq scheme: B,1,PRO,4
referenced by pdbx poly seq scheme: A,1,PRO,4

1,LEU,5
type: entity poly seq
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to chem comp: LEU
reference to entity poly: http://rdf.wwpdb.org/pdb/5JQF/entity_poly/1
entity poly seq.entity id: 1
entity poly seq.mon id: LEU
entity poly seq.num: 5
entity poly seq.hetero: n
referenced by pdbx poly seq scheme: B,1,LEU,5
referenced by pdbx poly seq scheme: A,1,LEU,5

1,GLY,6
type: entity poly seq
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to chem comp: GLY
reference to entity poly: http://rdf.wwpdb.org/pdb/5JQF/entity_poly/1
entity poly seq.entity id: 1
entity poly seq.mon id: GLY
entity poly seq.num: 6
entity poly seq.hetero: n
referenced by pdbx poly seq scheme: B,1,GLY,6
referenced by pdbx poly seq scheme: A,1,GLY,6

1,PRO,7
type: entity poly seq
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to chem comp: PRO
reference to entity poly: http://rdf.wwpdb.org/pdb/5JQF/entity_poly/1
entity poly seq.entity id: 1
entity poly seq.mon id: PRO
entity poly seq.num: 7
entity poly seq.hetero: n
referenced by pdbx poly seq scheme: B,1,PRO,7
referenced by pdbx poly seq scheme: A,1,PRO,7

1,VAL,8
type: entity poly seq
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to chem comp: VAL
reference to entity poly: http://rdf.wwpdb.org/pdb/5JQF/entity_poly/1
entity poly seq.entity id: 1
entity poly seq.mon id: VAL
entity poly seq.num: 8
entity poly seq.hetero: n
referenced by pdbx poly seq scheme: B,1,VAL,8
referenced by pdbx poly seq scheme: A,1,VAL,8

1,ASP,9
type: entity poly seq
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to chem comp: ASP
reference to entity poly: http://rdf.wwpdb.org/pdb/5JQF/entity_poly/1
entity poly seq.entity id: 1
entity poly seq.mon id: ASP
entity poly seq.num: 9
entity poly seq.hetero: n
referenced by pdbx poly seq scheme: B,1,ASP,9
referenced by pdbx poly seq scheme: A,1,ASP,9

1,GLU,10
type: entity poly seq
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to chem comp: GLU
reference to entity poly: http://rdf.wwpdb.org/pdb/5JQF/entity_poly/1
entity poly seq.entity id: 1
entity poly seq.mon id: GLU
entity poly seq.num: 10
entity poly seq.hetero: n
referenced by pdbx poly seq scheme: B,1,GLU,10
referenced by pdbx poly seq scheme: A,1,GLU,10

1,ASP,11
type: entity poly seq
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to chem comp: ASP
reference to entity poly: http://rdf.wwpdb.org/pdb/5JQF/entity_poly/1
entity poly seq.entity id: 1
entity poly seq.mon id: ASP
entity poly seq.num: 11
entity poly seq.hetero: n
referenced by pdbx poly seq scheme: B,1,ASP,11
referenced by pdbx poly seq scheme: A,1,ASP,11

1,GLN,12
type: entity poly seq
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to chem comp: GLN
reference to entity poly: http://rdf.wwpdb.org/pdb/5JQF/entity_poly/1
entity poly seq.entity id: 1
entity poly seq.mon id: GLN
entity poly seq.num: 12
entity poly seq.hetero: n
referenced by pdbx poly seq scheme: B,1,GLN,12
referenced by pdbx poly seq scheme: A,1,GLN,12

1,GLY,13
type: entity poly seq
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to chem comp: GLY
reference to entity poly: http://rdf.wwpdb.org/pdb/5JQF/entity_poly/1
entity poly seq.entity id: 1
entity poly seq.mon id: GLY
entity poly seq.num: 13
entity poly seq.hetero: n
referenced by pdbx poly seq scheme: B,1,GLY,13
referenced by pdbx poly seq scheme: A,1,GLY,13

1,GLU,14
type: entity poly seq
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to chem comp: GLU
reference to entity poly: http://rdf.wwpdb.org/pdb/5JQF/entity_poly/1
entity poly seq.entity id: 1
entity poly seq.mon id: GLU
entity poly seq.num: 14
entity poly seq.hetero: n
referenced by pdbx poly seq scheme: B,1,GLU,14
referenced by pdbx poly seq scheme: A,1,GLU,14

1,HIS,15
type: entity poly seq
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to chem comp: HIS
reference to entity poly: http://rdf.wwpdb.org/pdb/5JQF/entity_poly/1
entity poly seq.entity id: 1
entity poly seq.mon id: HIS
entity poly seq.num: 15
entity poly seq.hetero: n
referenced by pdbx poly seq scheme: B,1,HIS,15
referenced by pdbx poly seq scheme: A,1,HIS,15

1,TYR,16
type: entity poly seq
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to chem comp: TYR
reference to entity poly: http://rdf.wwpdb.org/pdb/5JQF/entity_poly/1
entity poly seq.entity id: 1
entity poly seq.mon id: TYR
entity poly seq.num: 16
entity poly seq.hetero: n
referenced by pdbx poly seq scheme: B,1,TYR,16
referenced by pdbx poly seq scheme: A,1,TYR,16

1,LEU,17
type: entity poly seq
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to chem comp: LEU
reference to entity poly: http://rdf.wwpdb.org/pdb/5JQF/entity_poly/1
entity poly seq.entity id: 1
entity poly seq.mon id: LEU
entity poly seq.num: 17
entity poly seq.hetero: n
referenced by pdbx poly seq scheme: B,1,LEU,17
referenced by pdbx poly seq scheme: A,1,LEU,17

1,PHE,18
type: entity poly seq
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to chem comp: PHE
reference to entity poly: http://rdf.wwpdb.org/pdb/5JQF/entity_poly/1
entity poly seq.entity id: 1
entity poly seq.mon id: PHE
entity poly seq.num: 18
entity poly seq.hetero: n
referenced by pdbx poly seq scheme: B,1,PHE,18
referenced by pdbx poly seq scheme: A,1,PHE,18

1,ALA,19
type: entity poly seq
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to chem comp: ALA
reference to entity poly: http://rdf.wwpdb.org/pdb/5JQF/entity_poly/1
entity poly seq.entity id: 1
entity poly seq.mon id: ALA
entity poly seq.num: 19
entity poly seq.hetero: n
referenced by pdbx poly seq scheme: B,1,ALA,19
referenced by pdbx poly seq scheme: A,1,ALA,19

1,GLY,20
type: entity poly seq
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to chem comp: GLY
reference to entity poly: http://rdf.wwpdb.org/pdb/5JQF/entity_poly/1
entity poly seq.entity id: 1
entity poly seq.mon id: GLY
entity poly seq.num: 20
entity poly seq.hetero: n
referenced by pdbx poly seq scheme: B,1,GLY,20
referenced by pdbx poly seq scheme: A,1,GLY,20

1,GLY,21
type: entity poly seq
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to chem comp: GLY
reference to entity poly: http://rdf.wwpdb.org/pdb/5JQF/entity_poly/1
entity poly seq.entity id: 1
entity poly seq.mon id: GLY
entity poly seq.num: 21
entity poly seq.hetero: n
referenced by pdbx poly seq scheme: B,1,GLY,21
referenced by pdbx poly seq scheme: A,1,GLY,21

1,1
type: entity src gen
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity: http://rdf.wwpdb.org/pdb/5JQF/entity/1
entity src gen.entity id: 1
entity src gen.pdbx src id: 1
entity src gen.pdbx alt source flag: sample
entity src gen.pdbx beg seq num: 1
entity src gen.pdbx end seq num: 21
entity src gen.pdbx gene src ncbi taxonomy id: 317655
entity src gen.pdbx gene src scientific name: Sphingopyxis alaskensis RB2256
entity src gen.pdbx host org ncbi taxonomy id: 469008
entity src gen.pdbx host org scientific name: Escherichia coli BL21(DE3)
entity src gen.pdbx host org vector type: plasmid
entity src gen.pdbx seq type: Biological sequence
entity src gen.plasmid name: pET41a
link to taxonomy source: taxonomy:317655
link to taxonomy host: taxonomy:469008

taxonomy:317655

taxonomy:469008

5JQF,X-RAY DIFFRACTION
type: exptl
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entry: 5JQF
exptl.entry id: 5JQF
exptl.method: X-RAY DIFFRACTION
exptl.crystals number: 1

http://rdf.wwpdb.org/pdb/5JQF/exptl_crystal_grow/1
type: exptl crystal grow
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to exptl crystal: http://rdf.wwpdb.org/pdb/5JQF/exptl_crystal/1
exptl crystal grow.crystal id: 1
exptl crystal grow.method: VAPOR DIFFUSION, SITTING DROP
exptl crystal grow.pdbx details: 0.2 M K2SO4, 20%(w/v) PEG 400
exptl crystal grow.temp: 291.15

Structure model,1,2
type: pdbx audit revision category
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to pdbx audit revision history: Structure model,2
pdbx audit revision category.data content type: Structure model
pdbx audit revision category.ordinal: 1
pdbx audit revision category.revision ordinal: 2
pdbx audit revision category.category: pdbx_audit_support

Structure model,2
referenced by pdbx audit revision category: Structure model,1,2
referenced by pdbx audit revision group: Structure model,1,2
type: pdbx audit revision history
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx audit revision history.data content type: Structure model
pdbx audit revision history.ordinal: 2
pdbx audit revision history.major revision: 1
pdbx audit revision history.minor revision: 1
pdbx audit revision history.revision date: 2017-09-06
referenced by pdbx audit revision item: Structure model,1,2

Structure model,2,3
type: pdbx audit revision category
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to pdbx audit revision history: Structure model,3
pdbx audit revision category.data content type: Structure model
pdbx audit revision category.ordinal: 2
pdbx audit revision category.revision ordinal: 3
pdbx audit revision category.category: citation

Structure model,3
referenced by pdbx audit revision category: Structure model,2,3
referenced by pdbx audit revision group: Structure model,2,3
referenced by pdbx audit revision group: Structure model,3,3
type: pdbx audit revision history
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx audit revision history.data content type: Structure model
pdbx audit revision history.ordinal: 3
pdbx audit revision history.major revision: 1
pdbx audit revision history.minor revision: 2
pdbx audit revision history.revision date: 2018-04-18
referenced by pdbx audit revision item: Structure model,7,3
referenced by pdbx audit revision item: Structure model,2,3
referenced by pdbx audit revision item: Structure model,3,3
referenced by pdbx audit revision item: Structure model,4,3
referenced by pdbx audit revision item: Structure model,5,3
referenced by pdbx audit revision item: Structure model,6,3

Structure model,3,4
type: pdbx audit revision category
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to pdbx audit revision history: Structure model,4
pdbx audit revision category.data content type: Structure model
pdbx audit revision category.ordinal: 3
pdbx audit revision category.revision ordinal: 4
pdbx audit revision category.category: database_PDB_remark

Structure model,4
referenced by pdbx audit revision category: Structure model,3,4
referenced by pdbx audit revision category: Structure model,4,4
referenced by pdbx audit revision category: Structure model,5,4
referenced by pdbx audit revision category: Structure model,6,4
referenced by pdbx audit revision category: Structure model,7,4
referenced by pdbx audit revision group: Structure model,4,4
referenced by pdbx audit revision group: Structure model,5,4
referenced by pdbx audit revision group: Structure model,6,4
type: pdbx audit revision history
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx audit revision history.data content type: Structure model
pdbx audit revision history.ordinal: 4
pdbx audit revision history.major revision: 1
pdbx audit revision history.minor revision: 3
pdbx audit revision history.revision date: 2019-05-08
referenced by pdbx audit revision item: Structure model,8,4

Structure model,4,4
type: pdbx audit revision category
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to pdbx audit revision history: Structure model,4
pdbx audit revision category.data content type: Structure model
pdbx audit revision category.ordinal: 4
pdbx audit revision category.revision ordinal: 4
pdbx audit revision category.category: pdbx_unobs_or_zero_occ_atoms

Structure model,5,4
type: pdbx audit revision category
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to pdbx audit revision history: Structure model,4
pdbx audit revision category.data content type: Structure model
pdbx audit revision category.ordinal: 5
pdbx audit revision category.revision ordinal: 4
pdbx audit revision category.category: pdbx_validate_close_contact

Structure model,6,4
type: pdbx audit revision category
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to pdbx audit revision history: Structure model,4
pdbx audit revision category.data content type: Structure model
pdbx audit revision category.ordinal: 6
pdbx audit revision category.revision ordinal: 4
pdbx audit revision category.category: struct_conn

Structure model,7,4
type: pdbx audit revision category
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to pdbx audit revision history: Structure model,4
pdbx audit revision category.data content type: Structure model
pdbx audit revision category.ordinal: 7
pdbx audit revision category.revision ordinal: 4
pdbx audit revision category.category: struct_conn_type

Structure model,8,5
type: pdbx audit revision category
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to pdbx audit revision history: Structure model,5
pdbx audit revision category.data content type: Structure model
pdbx audit revision category.ordinal: 8
pdbx audit revision category.revision ordinal: 5
pdbx audit revision category.category: atom_site

Structure model,5
referenced by pdbx audit revision category: Structure model,8,5
referenced by pdbx audit revision category: Structure model,9,5
referenced by pdbx audit revision category: Structure model,10,5
referenced by pdbx audit revision category: Structure model,11,5
referenced by pdbx audit revision category: Structure model,12,5
referenced by pdbx audit revision group: Structure model,7,5
referenced by pdbx audit revision group: Structure model,8,5
referenced by pdbx audit revision group: Structure model,9,5
type: pdbx audit revision history
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx audit revision history.data content type: Structure model
pdbx audit revision history.ordinal: 5
pdbx audit revision history.major revision: 2
pdbx audit revision history.minor revision: 0
pdbx audit revision history.revision date: 2021-06-16

Structure model,9,5
type: pdbx audit revision category
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to pdbx audit revision history: Structure model,5
pdbx audit revision category.data content type: Structure model
pdbx audit revision category.ordinal: 9
pdbx audit revision category.revision ordinal: 5
pdbx audit revision category.category: atom_site_anisotrop

Structure model,10,5
type: pdbx audit revision category
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to pdbx audit revision history: Structure model,5
pdbx audit revision category.data content type: Structure model
pdbx audit revision category.ordinal: 10
pdbx audit revision category.revision ordinal: 5
pdbx audit revision category.category: pdbx_unobs_or_zero_occ_atoms

Structure model,11,5
type: pdbx audit revision category
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to pdbx audit revision history: Structure model,5
pdbx audit revision category.data content type: Structure model
pdbx audit revision category.ordinal: 11
pdbx audit revision category.revision ordinal: 5
pdbx audit revision category.category: pdbx_validate_close_contact

Structure model,12,5
type: pdbx audit revision category
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to pdbx audit revision history: Structure model,5
pdbx audit revision category.data content type: Structure model
pdbx audit revision category.ordinal: 12
pdbx audit revision category.revision ordinal: 5
pdbx audit revision category.category: struct_conn

Structure model,1,1
type: pdbx audit revision details
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to pdbx audit revision history: Structure model,1
pdbx audit revision details.data content type: Structure model
pdbx audit revision details.ordinal: 1
pdbx audit revision details.revision ordinal: 1
pdbx audit revision details.provider: repository
pdbx audit revision details.type: Initial release

Structure model,1
referenced by pdbx audit revision details: Structure model,1,1
type: pdbx audit revision history
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx audit revision history.data content type: Structure model
pdbx audit revision history.ordinal: 1
pdbx audit revision history.major revision: 1
pdbx audit revision history.minor revision: 0
pdbx audit revision history.revision date: 2016-09-14

Structure model,1,2
type: pdbx audit revision group
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to pdbx audit revision history: Structure model,2
pdbx audit revision group.data content type: Structure model
pdbx audit revision group.ordinal: 1
pdbx audit revision group.revision ordinal: 2
pdbx audit revision group.group: Author supporting evidence

Structure model,2,3
type: pdbx audit revision group
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to pdbx audit revision history: Structure model,3
pdbx audit revision group.data content type: Structure model
pdbx audit revision group.ordinal: 2
pdbx audit revision group.revision ordinal: 3
pdbx audit revision group.group: Data collection

Structure model,3,3
type: pdbx audit revision group
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to pdbx audit revision history: Structure model,3
pdbx audit revision group.data content type: Structure model
pdbx audit revision group.ordinal: 3
pdbx audit revision group.revision ordinal: 3
pdbx audit revision group.group: Database references

Structure model,4,4
type: pdbx audit revision group
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to pdbx audit revision history: Structure model,4
pdbx audit revision group.data content type: Structure model
pdbx audit revision group.ordinal: 4
pdbx audit revision group.revision ordinal: 4
pdbx audit revision group.group: Advisory

Structure model,5,4
type: pdbx audit revision group
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to pdbx audit revision history: Structure model,4
pdbx audit revision group.data content type: Structure model
pdbx audit revision group.ordinal: 5
pdbx audit revision group.revision ordinal: 4
pdbx audit revision group.group: Data collection

Structure model,6,4
type: pdbx audit revision group
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to pdbx audit revision history: Structure model,4
pdbx audit revision group.data content type: Structure model
pdbx audit revision group.ordinal: 6
pdbx audit revision group.revision ordinal: 4
pdbx audit revision group.group: Derived calculations

Structure model,7,5
type: pdbx audit revision group
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to pdbx audit revision history: Structure model,5
pdbx audit revision group.data content type: Structure model
pdbx audit revision group.ordinal: 7
pdbx audit revision group.revision ordinal: 5
pdbx audit revision group.group: Advisory

Structure model,8,5
type: pdbx audit revision group
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to pdbx audit revision history: Structure model,5
pdbx audit revision group.data content type: Structure model
pdbx audit revision group.ordinal: 8
pdbx audit revision group.revision ordinal: 5
pdbx audit revision group.group: Atomic model

Structure model,9,5
type: pdbx audit revision group
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to pdbx audit revision history: Structure model,5
pdbx audit revision group.data content type: Structure model
pdbx audit revision group.ordinal: 9
pdbx audit revision group.revision ordinal: 5
pdbx audit revision group.group: Derived calculations

Structure model,1,2
type: pdbx audit revision item
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to pdbx audit revision history: Structure model,2
pdbx audit revision item.data content type: Structure model
pdbx audit revision item.ordinal: 1
pdbx audit revision item.revision ordinal: 2
pdbx audit revision item.item: _pdbx_audit_support.funding_organization

Structure model,2,3
type: pdbx audit revision item
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to pdbx audit revision history: Structure model,3
pdbx audit revision item.data content type: Structure model
pdbx audit revision item.ordinal: 2
pdbx audit revision item.revision ordinal: 3
pdbx audit revision item.item: _citation.journal_abbrev

Structure model,3,3
type: pdbx audit revision item
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to pdbx audit revision history: Structure model,3
pdbx audit revision item.data content type: Structure model
pdbx audit revision item.ordinal: 3
pdbx audit revision item.revision ordinal: 3
pdbx audit revision item.item: _citation.journal_volume

Structure model,4,3
type: pdbx audit revision item
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to pdbx audit revision history: Structure model,3
pdbx audit revision item.data content type: Structure model
pdbx audit revision item.ordinal: 4
pdbx audit revision item.revision ordinal: 3
pdbx audit revision item.item: _citation.page_first

Structure model,5,3
type: pdbx audit revision item
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to pdbx audit revision history: Structure model,3
pdbx audit revision item.data content type: Structure model
pdbx audit revision item.ordinal: 5
pdbx audit revision item.revision ordinal: 3
pdbx audit revision item.item: _citation.page_last

Structure model,6,3
type: pdbx audit revision item
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to pdbx audit revision history: Structure model,3
pdbx audit revision item.data content type: Structure model
pdbx audit revision item.ordinal: 6
pdbx audit revision item.revision ordinal: 3
pdbx audit revision item.item: _citation.pdbx_database_id_PubMed

Structure model,7,3
type: pdbx audit revision item
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to pdbx audit revision history: Structure model,3
pdbx audit revision item.data content type: Structure model
pdbx audit revision item.ordinal: 7
pdbx audit revision item.revision ordinal: 3
pdbx audit revision item.item: _citation.title

Structure model,8,4
type: pdbx audit revision item
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to pdbx audit revision history: Structure model,4
pdbx audit revision item.data content type: Structure model
pdbx audit revision item.ordinal: 8
pdbx audit revision item.revision ordinal: 4
pdbx audit revision item.item: _database_PDB_remark.text

http://rdf.wwpdb.org/pdb/5JQF/pdbx_audit_support/1
type: pdbx audit support
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx audit support.ordinal: 1
pdbx audit support.country: Germany
pdbx audit support.funding organization: German Research Foundation

http://rdf.wwpdb.org/pdb/5JQF/pdbx_audit_support/2
type: pdbx audit support
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx audit support.ordinal: 2
pdbx audit support.country: Germany
pdbx audit support.funding organization: LOEWE-Zentrum fuer Synthetische Mikrobiologie

unspecified,5JRK,PDB
type: pdbx database related
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx database related.content type: unspecified
pdbx database related.db id: 5JRK
pdbx database related.db name: PDB
pdbx database related.details: SpI is the substrate of SpI-IsoP (5JRK, SeMet-derived)

unspecified,5JRL,PDB
type: pdbx database related
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx database related.content type: unspecified
pdbx database related.db id: 5JRL
pdbx database related.db name: PDB
pdbx database related.details: SpI is the substrate of SpI-IsoP (5JRL, native)

5JQF
type: pdbx database status
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entry: 5JQF
pdbx database status.entry id: 5JQF
pdbx database status.sg entry: N
pdbx database status.deposit site: RCSB
pdbx database status.pdb format compatible: Y
pdbx database status.process site: PDBE
pdbx database status.recvd initial deposition date: 2016-05-04
pdbx database status.status code: REL
pdbx database status.status code sf: REL

http://rdf.wwpdb.org/pdb/5JQF/pdbx_entity_nonpoly/2
type: pdbx entity nonpoly
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity: http://rdf.wwpdb.org/pdb/5JQF/entity/2
pdbx entity nonpoly.entity id: 2
pdbx entity nonpoly.comp id: HOH
pdbx entity nonpoly.name: water

C,1
type: pdbx nonpoly scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx nonpoly scheme.asym id: C
pdbx nonpoly scheme.ndb seq num: 1
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 53
pdbx nonpoly scheme.entity id: 2
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 101
pdbx nonpoly scheme.pdb strand id: A

C,2
type: pdbx nonpoly scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx nonpoly scheme.asym id: C
pdbx nonpoly scheme.ndb seq num: 2
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 15
pdbx nonpoly scheme.entity id: 2
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 102
pdbx nonpoly scheme.pdb strand id: A

C,3
type: pdbx nonpoly scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx nonpoly scheme.asym id: C
pdbx nonpoly scheme.ndb seq num: 3
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 25
pdbx nonpoly scheme.entity id: 2
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 103
pdbx nonpoly scheme.pdb strand id: A

C,4
type: pdbx nonpoly scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx nonpoly scheme.asym id: C
pdbx nonpoly scheme.ndb seq num: 4
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 2
pdbx nonpoly scheme.entity id: 2
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 104
pdbx nonpoly scheme.pdb strand id: A

C,5
type: pdbx nonpoly scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx nonpoly scheme.asym id: C
pdbx nonpoly scheme.ndb seq num: 5
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 11
pdbx nonpoly scheme.entity id: 2
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 105
pdbx nonpoly scheme.pdb strand id: A

C,6
type: pdbx nonpoly scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx nonpoly scheme.asym id: C
pdbx nonpoly scheme.ndb seq num: 6
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 3
pdbx nonpoly scheme.entity id: 2
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 106
pdbx nonpoly scheme.pdb strand id: A

C,7
type: pdbx nonpoly scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx nonpoly scheme.asym id: C
pdbx nonpoly scheme.ndb seq num: 7
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 14
pdbx nonpoly scheme.entity id: 2
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 107
pdbx nonpoly scheme.pdb strand id: A

C,8
type: pdbx nonpoly scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx nonpoly scheme.asym id: C
pdbx nonpoly scheme.ndb seq num: 8
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 33
pdbx nonpoly scheme.entity id: 2
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 108
pdbx nonpoly scheme.pdb strand id: A

C,9
type: pdbx nonpoly scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx nonpoly scheme.asym id: C
pdbx nonpoly scheme.ndb seq num: 9
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 5
pdbx nonpoly scheme.entity id: 2
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 109
pdbx nonpoly scheme.pdb strand id: A

C,10
type: pdbx nonpoly scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx nonpoly scheme.asym id: C
pdbx nonpoly scheme.ndb seq num: 10
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 23
pdbx nonpoly scheme.entity id: 2
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 110
pdbx nonpoly scheme.pdb strand id: A

C,11
type: pdbx nonpoly scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx nonpoly scheme.asym id: C
pdbx nonpoly scheme.ndb seq num: 11
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 4
pdbx nonpoly scheme.entity id: 2
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 111
pdbx nonpoly scheme.pdb strand id: A

C,12
type: pdbx nonpoly scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx nonpoly scheme.asym id: C
pdbx nonpoly scheme.ndb seq num: 12
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 12
pdbx nonpoly scheme.entity id: 2
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 112
pdbx nonpoly scheme.pdb strand id: A

C,13
type: pdbx nonpoly scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx nonpoly scheme.asym id: C
pdbx nonpoly scheme.ndb seq num: 13
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 35
pdbx nonpoly scheme.entity id: 2
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 113
pdbx nonpoly scheme.pdb strand id: A

C,14
type: pdbx nonpoly scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx nonpoly scheme.asym id: C
pdbx nonpoly scheme.ndb seq num: 14
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 41
pdbx nonpoly scheme.entity id: 2
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 114
pdbx nonpoly scheme.pdb strand id: A

C,15
type: pdbx nonpoly scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx nonpoly scheme.asym id: C
pdbx nonpoly scheme.ndb seq num: 15
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 30
pdbx nonpoly scheme.entity id: 2
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 115
pdbx nonpoly scheme.pdb strand id: A

C,16
type: pdbx nonpoly scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx nonpoly scheme.asym id: C
pdbx nonpoly scheme.ndb seq num: 16
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 8
pdbx nonpoly scheme.entity id: 2
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 116
pdbx nonpoly scheme.pdb strand id: A

C,17
type: pdbx nonpoly scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx nonpoly scheme.asym id: C
pdbx nonpoly scheme.ndb seq num: 17
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 50
pdbx nonpoly scheme.entity id: 2
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 117
pdbx nonpoly scheme.pdb strand id: A

C,18
type: pdbx nonpoly scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx nonpoly scheme.asym id: C
pdbx nonpoly scheme.ndb seq num: 18
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 40
pdbx nonpoly scheme.entity id: 2
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 118
pdbx nonpoly scheme.pdb strand id: A

D,1
type: pdbx nonpoly scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx nonpoly scheme.asym id: D
pdbx nonpoly scheme.ndb seq num: 1
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 21
pdbx nonpoly scheme.entity id: 2
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 101
pdbx nonpoly scheme.pdb strand id: B

D,2
type: pdbx nonpoly scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx nonpoly scheme.asym id: D
pdbx nonpoly scheme.ndb seq num: 2
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 17
pdbx nonpoly scheme.entity id: 2
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 102
pdbx nonpoly scheme.pdb strand id: B

D,3
type: pdbx nonpoly scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx nonpoly scheme.asym id: D
pdbx nonpoly scheme.ndb seq num: 3
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 19
pdbx nonpoly scheme.entity id: 2
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 103
pdbx nonpoly scheme.pdb strand id: B

D,4
type: pdbx nonpoly scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx nonpoly scheme.asym id: D
pdbx nonpoly scheme.ndb seq num: 4
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 54
pdbx nonpoly scheme.entity id: 2
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 104
pdbx nonpoly scheme.pdb strand id: B

D,5
type: pdbx nonpoly scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx nonpoly scheme.asym id: D
pdbx nonpoly scheme.ndb seq num: 5
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 6
pdbx nonpoly scheme.entity id: 2
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 105
pdbx nonpoly scheme.pdb strand id: B

D,6
type: pdbx nonpoly scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx nonpoly scheme.asym id: D
pdbx nonpoly scheme.ndb seq num: 6
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 10
pdbx nonpoly scheme.entity id: 2
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 106
pdbx nonpoly scheme.pdb strand id: B

D,7
type: pdbx nonpoly scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx nonpoly scheme.asym id: D
pdbx nonpoly scheme.ndb seq num: 7
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 9
pdbx nonpoly scheme.entity id: 2
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 107
pdbx nonpoly scheme.pdb strand id: B

D,8
type: pdbx nonpoly scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx nonpoly scheme.asym id: D
pdbx nonpoly scheme.ndb seq num: 8
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 45
pdbx nonpoly scheme.entity id: 2
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 108
pdbx nonpoly scheme.pdb strand id: B

D,9
type: pdbx nonpoly scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx nonpoly scheme.asym id: D
pdbx nonpoly scheme.ndb seq num: 9
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 42
pdbx nonpoly scheme.entity id: 2
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 109
pdbx nonpoly scheme.pdb strand id: B

D,10
type: pdbx nonpoly scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx nonpoly scheme.asym id: D
pdbx nonpoly scheme.ndb seq num: 10
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 7
pdbx nonpoly scheme.entity id: 2
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 110
pdbx nonpoly scheme.pdb strand id: B

D,11
type: pdbx nonpoly scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx nonpoly scheme.asym id: D
pdbx nonpoly scheme.ndb seq num: 11
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 32
pdbx nonpoly scheme.entity id: 2
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 111
pdbx nonpoly scheme.pdb strand id: B

D,12
type: pdbx nonpoly scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx nonpoly scheme.asym id: D
pdbx nonpoly scheme.ndb seq num: 12
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 20
pdbx nonpoly scheme.entity id: 2
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 112
pdbx nonpoly scheme.pdb strand id: B

D,13
type: pdbx nonpoly scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx nonpoly scheme.asym id: D
pdbx nonpoly scheme.ndb seq num: 13
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 13
pdbx nonpoly scheme.entity id: 2
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 113
pdbx nonpoly scheme.pdb strand id: B

D,14
type: pdbx nonpoly scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx nonpoly scheme.asym id: D
pdbx nonpoly scheme.ndb seq num: 14
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 46
pdbx nonpoly scheme.entity id: 2
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 114
pdbx nonpoly scheme.pdb strand id: B

D,15
type: pdbx nonpoly scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx nonpoly scheme.asym id: D
pdbx nonpoly scheme.ndb seq num: 15
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 24
pdbx nonpoly scheme.entity id: 2
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 115
pdbx nonpoly scheme.pdb strand id: B

D,16
type: pdbx nonpoly scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx nonpoly scheme.asym id: D
pdbx nonpoly scheme.ndb seq num: 16
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 29
pdbx nonpoly scheme.entity id: 2
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 116
pdbx nonpoly scheme.pdb strand id: B

D,17
type: pdbx nonpoly scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx nonpoly scheme.asym id: D
pdbx nonpoly scheme.ndb seq num: 17
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 51
pdbx nonpoly scheme.entity id: 2
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 117
pdbx nonpoly scheme.pdb strand id: B

A,1,GLY,1
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,GLY,1
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/A
pdbx poly seq scheme.asym id: A
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: GLY
pdbx poly seq scheme.seq id: 1
pdbx poly seq scheme.auth mon id: GLY
pdbx poly seq scheme.auth seq num: 1
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 1
pdbx poly seq scheme.pdb mon id: GLY
pdbx poly seq scheme.pdb seq num: 1
pdbx poly seq scheme.pdb strand id: A

http://rdf.wwpdb.org/pdb/5JQF/struct_asym/A
referenced by pdbx poly seq scheme: A,1,GLY,1
referenced by pdbx poly seq scheme: A,1,ILE,2
referenced by pdbx poly seq scheme: A,1,GLU,3
referenced by pdbx poly seq scheme: A,1,PRO,4
referenced by pdbx poly seq scheme: A,1,LEU,5
referenced by pdbx poly seq scheme: A,1,GLY,6
referenced by pdbx poly seq scheme: A,1,PRO,7
referenced by pdbx poly seq scheme: A,1,VAL,8
referenced by pdbx poly seq scheme: A,1,ASP,9
referenced by pdbx poly seq scheme: A,1,GLU,10
referenced by pdbx poly seq scheme: A,1,ASP,11
referenced by pdbx poly seq scheme: A,1,GLN,12
referenced by pdbx poly seq scheme: A,1,GLY,13
referenced by pdbx poly seq scheme: A,1,GLU,14
referenced by pdbx poly seq scheme: A,1,HIS,15
referenced by pdbx poly seq scheme: A,1,TYR,16
referenced by pdbx poly seq scheme: A,1,LEU,17
referenced by pdbx poly seq scheme: A,1,PHE,18
referenced by pdbx poly seq scheme: A,1,ALA,19
referenced by pdbx poly seq scheme: A,1,GLY,20
referenced by pdbx poly seq scheme: A,1,GLY,21
type: struct asym
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity: http://rdf.wwpdb.org/pdb/5JQF/entity/1
struct asym.id: A
struct asym.entity id: 1
struct asym.pdbx blank PDB chainid flag: N
struct asym.pdbx modified: N

A,1,ILE,2
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,ILE,2
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/A
pdbx poly seq scheme.asym id: A
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: ILE
pdbx poly seq scheme.seq id: 2
pdbx poly seq scheme.auth mon id: ILE
pdbx poly seq scheme.auth seq num: 2
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 2
pdbx poly seq scheme.pdb mon id: ILE
pdbx poly seq scheme.pdb seq num: 2
pdbx poly seq scheme.pdb strand id: A

A,1,GLU,3
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,GLU,3
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/A
pdbx poly seq scheme.asym id: A
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: GLU
pdbx poly seq scheme.seq id: 3
pdbx poly seq scheme.auth mon id: GLU
pdbx poly seq scheme.auth seq num: 3
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 3
pdbx poly seq scheme.pdb mon id: GLU
pdbx poly seq scheme.pdb seq num: 3
pdbx poly seq scheme.pdb strand id: A

A,1,PRO,4
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,PRO,4
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/A
pdbx poly seq scheme.asym id: A
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: PRO
pdbx poly seq scheme.seq id: 4
pdbx poly seq scheme.auth mon id: PRO
pdbx poly seq scheme.auth seq num: 4
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 4
pdbx poly seq scheme.pdb mon id: PRO
pdbx poly seq scheme.pdb seq num: 4
pdbx poly seq scheme.pdb strand id: A

A,1,LEU,5
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,LEU,5
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/A
pdbx poly seq scheme.asym id: A
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: LEU
pdbx poly seq scheme.seq id: 5
pdbx poly seq scheme.auth mon id: LEU
pdbx poly seq scheme.auth seq num: 5
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 5
pdbx poly seq scheme.pdb mon id: LEU
pdbx poly seq scheme.pdb seq num: 5
pdbx poly seq scheme.pdb strand id: A

A,1,GLY,6
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,GLY,6
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/A
pdbx poly seq scheme.asym id: A
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: GLY
pdbx poly seq scheme.seq id: 6
pdbx poly seq scheme.auth mon id: GLY
pdbx poly seq scheme.auth seq num: 6
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 6
pdbx poly seq scheme.pdb mon id: GLY
pdbx poly seq scheme.pdb seq num: 6
pdbx poly seq scheme.pdb strand id: A

A,1,PRO,7
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,PRO,7
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/A
pdbx poly seq scheme.asym id: A
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: PRO
pdbx poly seq scheme.seq id: 7
pdbx poly seq scheme.auth mon id: PRO
pdbx poly seq scheme.auth seq num: 7
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 7
pdbx poly seq scheme.pdb mon id: PRO
pdbx poly seq scheme.pdb seq num: 7
pdbx poly seq scheme.pdb strand id: A

A,1,VAL,8
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,VAL,8
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/A
pdbx poly seq scheme.asym id: A
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: VAL
pdbx poly seq scheme.seq id: 8
pdbx poly seq scheme.auth mon id: VAL
pdbx poly seq scheme.auth seq num: 8
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 8
pdbx poly seq scheme.pdb mon id: VAL
pdbx poly seq scheme.pdb seq num: 8
pdbx poly seq scheme.pdb strand id: A

A,1,ASP,9
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,ASP,9
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/A
pdbx poly seq scheme.asym id: A
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: ASP
pdbx poly seq scheme.seq id: 9
pdbx poly seq scheme.auth mon id: ASP
pdbx poly seq scheme.auth seq num: 9
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 9
pdbx poly seq scheme.pdb mon id: ASP
pdbx poly seq scheme.pdb seq num: 9
pdbx poly seq scheme.pdb strand id: A

A,1,GLU,10
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,GLU,10
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/A
pdbx poly seq scheme.asym id: A
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: GLU
pdbx poly seq scheme.seq id: 10
pdbx poly seq scheme.auth mon id: GLU
pdbx poly seq scheme.auth seq num: 10
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 10
pdbx poly seq scheme.pdb mon id: GLU
pdbx poly seq scheme.pdb seq num: 10
pdbx poly seq scheme.pdb strand id: A

A,1,ASP,11
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,ASP,11
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/A
pdbx poly seq scheme.asym id: A
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: ASP
pdbx poly seq scheme.seq id: 11
pdbx poly seq scheme.auth mon id: ASP
pdbx poly seq scheme.auth seq num: 11
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 11
pdbx poly seq scheme.pdb mon id: ASP
pdbx poly seq scheme.pdb seq num: 11
pdbx poly seq scheme.pdb strand id: A

A,1,GLN,12
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,GLN,12
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/A
pdbx poly seq scheme.asym id: A
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: GLN
pdbx poly seq scheme.seq id: 12
pdbx poly seq scheme.auth mon id: GLN
pdbx poly seq scheme.auth seq num: 12
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 12
pdbx poly seq scheme.pdb mon id: GLN
pdbx poly seq scheme.pdb seq num: 12
pdbx poly seq scheme.pdb strand id: A

A,1,GLY,13
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,GLY,13
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/A
pdbx poly seq scheme.asym id: A
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: GLY
pdbx poly seq scheme.seq id: 13
pdbx poly seq scheme.auth mon id: GLY
pdbx poly seq scheme.auth seq num: 13
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 13
pdbx poly seq scheme.pdb mon id: GLY
pdbx poly seq scheme.pdb seq num: 13
pdbx poly seq scheme.pdb strand id: A

A,1,GLU,14
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,GLU,14
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/A
pdbx poly seq scheme.asym id: A
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: GLU
pdbx poly seq scheme.seq id: 14
pdbx poly seq scheme.auth mon id: GLU
pdbx poly seq scheme.auth seq num: 14
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 14
pdbx poly seq scheme.pdb mon id: GLU
pdbx poly seq scheme.pdb seq num: 14
pdbx poly seq scheme.pdb strand id: A

A,1,HIS,15
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,HIS,15
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/A
pdbx poly seq scheme.asym id: A
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: HIS
pdbx poly seq scheme.seq id: 15
pdbx poly seq scheme.auth mon id: HIS
pdbx poly seq scheme.auth seq num: 15
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 15
pdbx poly seq scheme.pdb mon id: HIS
pdbx poly seq scheme.pdb seq num: 15
pdbx poly seq scheme.pdb strand id: A

A,1,TYR,16
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,TYR,16
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/A
pdbx poly seq scheme.asym id: A
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: TYR
pdbx poly seq scheme.seq id: 16
pdbx poly seq scheme.auth mon id: TYR
pdbx poly seq scheme.auth seq num: 16
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 16
pdbx poly seq scheme.pdb mon id: TYR
pdbx poly seq scheme.pdb seq num: 16
pdbx poly seq scheme.pdb strand id: A

A,1,LEU,17
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,LEU,17
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/A
pdbx poly seq scheme.asym id: A
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: LEU
pdbx poly seq scheme.seq id: 17
pdbx poly seq scheme.auth mon id: LEU
pdbx poly seq scheme.auth seq num: 17
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 17
pdbx poly seq scheme.pdb mon id: LEU
pdbx poly seq scheme.pdb seq num: 17
pdbx poly seq scheme.pdb strand id: A

A,1,PHE,18
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,PHE,18
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/A
pdbx poly seq scheme.asym id: A
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: PHE
pdbx poly seq scheme.seq id: 18
pdbx poly seq scheme.auth mon id: PHE
pdbx poly seq scheme.auth seq num: 18
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 18
pdbx poly seq scheme.pdb mon id: PHE
pdbx poly seq scheme.pdb seq num: 18
pdbx poly seq scheme.pdb strand id: A

A,1,ALA,19
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,ALA,19
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/A
pdbx poly seq scheme.asym id: A
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: ALA
pdbx poly seq scheme.seq id: 19
pdbx poly seq scheme.auth mon id: ALA
pdbx poly seq scheme.auth seq num: 19
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 19
pdbx poly seq scheme.pdb mon id: ALA
pdbx poly seq scheme.pdb seq num: 19
pdbx poly seq scheme.pdb strand id: A

A,1,GLY,20
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,GLY,20
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/A
pdbx poly seq scheme.asym id: A
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: GLY
pdbx poly seq scheme.seq id: 20
pdbx poly seq scheme.auth mon id: GLY
pdbx poly seq scheme.auth seq num: 20
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 20
pdbx poly seq scheme.pdb mon id: GLY
pdbx poly seq scheme.pdb seq num: 20
pdbx poly seq scheme.pdb strand id: A

A,1,GLY,21
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,GLY,21
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/A
pdbx poly seq scheme.asym id: A
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: GLY
pdbx poly seq scheme.seq id: 21
pdbx poly seq scheme.auth mon id: GLY
pdbx poly seq scheme.auth seq num: 21
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 21
pdbx poly seq scheme.pdb mon id: GLY
pdbx poly seq scheme.pdb seq num: 21
pdbx poly seq scheme.pdb strand id: A

B,1,GLY,1
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,GLY,1
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/B
pdbx poly seq scheme.asym id: B
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: GLY
pdbx poly seq scheme.seq id: 1
pdbx poly seq scheme.auth mon id: GLY
pdbx poly seq scheme.auth seq num: 1
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 1
pdbx poly seq scheme.pdb mon id: GLY
pdbx poly seq scheme.pdb seq num: 1
pdbx poly seq scheme.pdb strand id: B

http://rdf.wwpdb.org/pdb/5JQF/struct_asym/B
referenced by pdbx poly seq scheme: B,1,GLY,1
referenced by pdbx poly seq scheme: B,1,ILE,2
referenced by pdbx poly seq scheme: B,1,GLU,3
referenced by pdbx poly seq scheme: B,1,PRO,4
referenced by pdbx poly seq scheme: B,1,LEU,5
referenced by pdbx poly seq scheme: B,1,GLY,6
referenced by pdbx poly seq scheme: B,1,PRO,7
referenced by pdbx poly seq scheme: B,1,VAL,8
referenced by pdbx poly seq scheme: B,1,ASP,9
referenced by pdbx poly seq scheme: B,1,GLU,10
referenced by pdbx poly seq scheme: B,1,ASP,11
referenced by pdbx poly seq scheme: B,1,GLN,12
referenced by pdbx poly seq scheme: B,1,GLY,13
referenced by pdbx poly seq scheme: B,1,GLU,14
referenced by pdbx poly seq scheme: B,1,HIS,15
referenced by pdbx poly seq scheme: B,1,TYR,16
referenced by pdbx poly seq scheme: B,1,LEU,17
referenced by pdbx poly seq scheme: B,1,PHE,18
referenced by pdbx poly seq scheme: B,1,ALA,19
referenced by pdbx poly seq scheme: B,1,GLY,20
referenced by pdbx poly seq scheme: B,1,GLY,21
type: struct asym
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity: http://rdf.wwpdb.org/pdb/5JQF/entity/1
struct asym.id: B
struct asym.entity id: 1
struct asym.pdbx blank PDB chainid flag: N
struct asym.pdbx modified: N

B,1,ILE,2
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,ILE,2
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/B
pdbx poly seq scheme.asym id: B
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: ILE
pdbx poly seq scheme.seq id: 2
pdbx poly seq scheme.auth mon id: ILE
pdbx poly seq scheme.auth seq num: 2
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 2
pdbx poly seq scheme.pdb mon id: ILE
pdbx poly seq scheme.pdb seq num: 2
pdbx poly seq scheme.pdb strand id: B

B,1,GLU,3
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,GLU,3
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/B
pdbx poly seq scheme.asym id: B
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: GLU
pdbx poly seq scheme.seq id: 3
pdbx poly seq scheme.auth mon id: GLU
pdbx poly seq scheme.auth seq num: 3
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 3
pdbx poly seq scheme.pdb mon id: GLU
pdbx poly seq scheme.pdb seq num: 3
pdbx poly seq scheme.pdb strand id: B

B,1,PRO,4
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,PRO,4
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/B
pdbx poly seq scheme.asym id: B
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: PRO
pdbx poly seq scheme.seq id: 4
pdbx poly seq scheme.auth mon id: PRO
pdbx poly seq scheme.auth seq num: 4
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 4
pdbx poly seq scheme.pdb mon id: PRO
pdbx poly seq scheme.pdb seq num: 4
pdbx poly seq scheme.pdb strand id: B

B,1,LEU,5
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,LEU,5
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/B
pdbx poly seq scheme.asym id: B
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: LEU
pdbx poly seq scheme.seq id: 5
pdbx poly seq scheme.auth mon id: LEU
pdbx poly seq scheme.auth seq num: 5
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 5
pdbx poly seq scheme.pdb mon id: LEU
pdbx poly seq scheme.pdb seq num: 5
pdbx poly seq scheme.pdb strand id: B

B,1,GLY,6
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,GLY,6
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/B
pdbx poly seq scheme.asym id: B
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: GLY
pdbx poly seq scheme.seq id: 6
pdbx poly seq scheme.auth mon id: GLY
pdbx poly seq scheme.auth seq num: 6
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 6
pdbx poly seq scheme.pdb mon id: GLY
pdbx poly seq scheme.pdb seq num: 6
pdbx poly seq scheme.pdb strand id: B

B,1,PRO,7
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,PRO,7
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/B
pdbx poly seq scheme.asym id: B
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: PRO
pdbx poly seq scheme.seq id: 7
pdbx poly seq scheme.auth mon id: PRO
pdbx poly seq scheme.auth seq num: 7
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 7
pdbx poly seq scheme.pdb mon id: PRO
pdbx poly seq scheme.pdb seq num: 7
pdbx poly seq scheme.pdb strand id: B

B,1,VAL,8
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,VAL,8
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/B
pdbx poly seq scheme.asym id: B
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: VAL
pdbx poly seq scheme.seq id: 8
pdbx poly seq scheme.auth mon id: VAL
pdbx poly seq scheme.auth seq num: 8
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 8
pdbx poly seq scheme.pdb mon id: VAL
pdbx poly seq scheme.pdb seq num: 8
pdbx poly seq scheme.pdb strand id: B

B,1,ASP,9
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,ASP,9
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/B
pdbx poly seq scheme.asym id: B
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: ASP
pdbx poly seq scheme.seq id: 9
pdbx poly seq scheme.auth mon id: ASP
pdbx poly seq scheme.auth seq num: 9
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 9
pdbx poly seq scheme.pdb mon id: ASP
pdbx poly seq scheme.pdb seq num: 9
pdbx poly seq scheme.pdb strand id: B

B,1,GLU,10
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,GLU,10
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/B
pdbx poly seq scheme.asym id: B
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: GLU
pdbx poly seq scheme.seq id: 10
pdbx poly seq scheme.auth mon id: GLU
pdbx poly seq scheme.auth seq num: 10
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 10
pdbx poly seq scheme.pdb mon id: GLU
pdbx poly seq scheme.pdb seq num: 10
pdbx poly seq scheme.pdb strand id: B

B,1,ASP,11
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,ASP,11
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/B
pdbx poly seq scheme.asym id: B
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: ASP
pdbx poly seq scheme.seq id: 11
pdbx poly seq scheme.auth mon id: ASP
pdbx poly seq scheme.auth seq num: 11
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 11
pdbx poly seq scheme.pdb mon id: ASP
pdbx poly seq scheme.pdb seq num: 11
pdbx poly seq scheme.pdb strand id: B

B,1,GLN,12
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,GLN,12
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/B
pdbx poly seq scheme.asym id: B
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: GLN
pdbx poly seq scheme.seq id: 12
pdbx poly seq scheme.auth mon id: GLN
pdbx poly seq scheme.auth seq num: 12
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 12
pdbx poly seq scheme.pdb mon id: GLN
pdbx poly seq scheme.pdb seq num: 12
pdbx poly seq scheme.pdb strand id: B

B,1,GLY,13
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,GLY,13
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/B
pdbx poly seq scheme.asym id: B
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: GLY
pdbx poly seq scheme.seq id: 13
pdbx poly seq scheme.auth mon id: GLY
pdbx poly seq scheme.auth seq num: 13
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 13
pdbx poly seq scheme.pdb mon id: GLY
pdbx poly seq scheme.pdb seq num: 13
pdbx poly seq scheme.pdb strand id: B

B,1,GLU,14
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,GLU,14
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/B
pdbx poly seq scheme.asym id: B
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: GLU
pdbx poly seq scheme.seq id: 14
pdbx poly seq scheme.auth mon id: GLU
pdbx poly seq scheme.auth seq num: 14
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 14
pdbx poly seq scheme.pdb mon id: GLU
pdbx poly seq scheme.pdb seq num: 14
pdbx poly seq scheme.pdb strand id: B

B,1,HIS,15
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,HIS,15
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/B
pdbx poly seq scheme.asym id: B
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: HIS
pdbx poly seq scheme.seq id: 15
pdbx poly seq scheme.auth mon id: HIS
pdbx poly seq scheme.auth seq num: 15
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 15
pdbx poly seq scheme.pdb mon id: HIS
pdbx poly seq scheme.pdb seq num: 15
pdbx poly seq scheme.pdb strand id: B

B,1,TYR,16
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,TYR,16
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/B
pdbx poly seq scheme.asym id: B
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: TYR
pdbx poly seq scheme.seq id: 16
pdbx poly seq scheme.auth mon id: TYR
pdbx poly seq scheme.auth seq num: 16
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 16
pdbx poly seq scheme.pdb mon id: TYR
pdbx poly seq scheme.pdb seq num: 16
pdbx poly seq scheme.pdb strand id: B

B,1,LEU,17
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,LEU,17
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/B
pdbx poly seq scheme.asym id: B
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: LEU
pdbx poly seq scheme.seq id: 17
pdbx poly seq scheme.auth mon id: LEU
pdbx poly seq scheme.auth seq num: 17
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 17
pdbx poly seq scheme.pdb mon id: LEU
pdbx poly seq scheme.pdb seq num: 17
pdbx poly seq scheme.pdb strand id: B

B,1,PHE,18
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,PHE,18
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/B
pdbx poly seq scheme.asym id: B
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: PHE
pdbx poly seq scheme.seq id: 18
pdbx poly seq scheme.auth mon id: PHE
pdbx poly seq scheme.auth seq num: 18
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 18
pdbx poly seq scheme.pdb mon id: PHE
pdbx poly seq scheme.pdb seq num: 18
pdbx poly seq scheme.pdb strand id: B

B,1,ALA,19
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,ALA,19
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/B
pdbx poly seq scheme.asym id: B
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: ALA
pdbx poly seq scheme.seq id: 19
pdbx poly seq scheme.auth mon id: ALA
pdbx poly seq scheme.auth seq num: 19
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 19
pdbx poly seq scheme.pdb mon id: ALA
pdbx poly seq scheme.pdb seq num: 19
pdbx poly seq scheme.pdb strand id: B

B,1,GLY,20
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,GLY,20
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/B
pdbx poly seq scheme.asym id: B
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: GLY
pdbx poly seq scheme.seq id: 20
pdbx poly seq scheme.auth mon id: GLY
pdbx poly seq scheme.auth seq num: 20
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 20
pdbx poly seq scheme.pdb mon id: GLY
pdbx poly seq scheme.pdb seq num: 20
pdbx poly seq scheme.pdb strand id: B

B,1,GLY,21
type: pdbx poly seq scheme
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity poly seq: 1,GLY,21
reference to struct asym: http://rdf.wwpdb.org/pdb/5JQF/struct_asym/B
pdbx poly seq scheme.asym id: B
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: GLY
pdbx poly seq scheme.seq id: 21
pdbx poly seq scheme.auth mon id: GLY
pdbx poly seq scheme.auth seq num: 21
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 21
pdbx poly seq scheme.pdb mon id: GLY
pdbx poly seq scheme.pdb seq num: 21
pdbx poly seq scheme.pdb strand id: B

http://rdf.wwpdb.org/pdb/5JQF/pdbx_struct_assembly/1
type: pdbx struct assembly
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx struct assembly.id: 1
pdbx struct assembly.details: author_defined_assembly
pdbx struct assembly.oligomeric count: 1
pdbx struct assembly.oligomeric details: monomeric
referenced by pdbx struct assembly gen: 1,A,C,1

http://rdf.wwpdb.org/pdb/5JQF/pdbx_struct_assembly/2
type: pdbx struct assembly
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx struct assembly.id: 2
pdbx struct assembly.details: author_defined_assembly
pdbx struct assembly.oligomeric count: 1
pdbx struct assembly.oligomeric details: monomeric
referenced by pdbx struct assembly gen: 2,B,D,1

1,A,C,1
type: pdbx struct assembly gen
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to pdbx struct assembly: http://rdf.wwpdb.org/pdb/5JQF/pdbx_struct_assembly/1
pdbx struct assembly gen.assembly id: 1
pdbx struct assembly gen.asym id list: A,C
pdbx struct assembly gen.oper expression: 1

2,B,D,1
type: pdbx struct assembly gen
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to pdbx struct assembly: http://rdf.wwpdb.org/pdb/5JQF/pdbx_struct_assembly/2
pdbx struct assembly gen.assembly id: 2
pdbx struct assembly gen.asym id list: B,D
pdbx struct assembly gen.oper expression: 1

http://rdf.wwpdb.org/pdb/5JQF/pdbx_struct_oper_list/1
type: pdbx struct oper list
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx struct oper list.id: 1
pdbx struct oper list.matrix11: 1
pdbx struct oper list.matrix12: 0
pdbx struct oper list.matrix13: 0
pdbx struct oper list.matrix21: 0
pdbx struct oper list.matrix22: 1
pdbx struct oper list.matrix23: 0
pdbx struct oper list.matrix31: 0
pdbx struct oper list.matrix32: 0
pdbx struct oper list.matrix33: 1
pdbx struct oper list.name: 1_555
pdbx struct oper list.symmetry operation: x,y,z
pdbx struct oper list.type: identity operation
pdbx struct oper list.vector1: 0
pdbx struct oper list.vector2: 0
pdbx struct oper list.vector3: 0

1,2,AA1
type: pdbx struct sheet hbond
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to struct sheet: AA1
pdbx struct sheet hbond.range id 1: 1
pdbx struct sheet hbond.range id 2: 2
pdbx struct sheet hbond.sheet id: AA1
pdbx struct sheet hbond.range 1 auth asym id: A
pdbx struct sheet hbond.range 1 auth atom id: N
pdbx struct sheet hbond.range 1 auth comp id: GLY
pdbx struct sheet hbond.range 1 auth seq id: 20
pdbx struct sheet hbond.range 1 label asym id: A
pdbx struct sheet hbond.range 1 label atom id: N
pdbx struct sheet hbond.range 1 label comp id: GLY
pdbx struct sheet hbond.range 1 label seq id: 20
pdbx struct sheet hbond.range 2 auth asym id: B
pdbx struct sheet hbond.range 2 auth atom id: O
pdbx struct sheet hbond.range 2 auth comp id: PHE
pdbx struct sheet hbond.range 2 auth seq id: 18
pdbx struct sheet hbond.range 2 label asym id: B
pdbx struct sheet hbond.range 2 label atom id: O
pdbx struct sheet hbond.range 2 label comp id: PHE
pdbx struct sheet hbond.range 2 label seq id: 18

AA1
referenced by pdbx struct sheet hbond: 1,2,AA1
type: struct sheet
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
struct sheet.id: AA1
struct sheet.number strands: 2
referenced by struct sheet order: 1,2,AA1
referenced by struct sheet range: 2,AA1
referenced by struct sheet range: 1,AA1

http://rdf.wwpdb.org/pdb/5JQF/pdbx_validate_torsion/1
type: pdbx validate torsion
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx validate torsion.id: 1
pdbx validate torsion.pdb model num: 1
pdbx validate torsion.auth asym id: A
pdbx validate torsion.auth comp id: GLU
pdbx validate torsion.auth seq id: 14
pdbx validate torsion.phi: -124.31
pdbx validate torsion.psi: -120.62

http://rdf.wwpdb.org/pdb/5JQF/pdbx_validate_torsion/2
type: pdbx validate torsion
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
pdbx validate torsion.id: 2
pdbx validate torsion.pdb model num: 1
pdbx validate torsion.auth asym id: B
pdbx validate torsion.auth comp id: GLU
pdbx validate torsion.auth seq id: 14
pdbx validate torsion.phi: -110.15
pdbx validate torsion.psi: -119.72

5JQF,X-RAY DIFFRACTION
type: refine
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entry: 5JQF
refine.entry id: 5JQF
refine.pdbx refine id: X-RAY DIFFRACTION
refine.b iso max: 25.23
refine.b iso mean: 6.914
refine.b iso min: 3.57
refine.aniso B11: 0.13
refine.aniso B12: 0.07
refine.aniso B13: 0
refine.aniso B22: 0.13
refine.aniso B23: 0
refine.aniso B33: -0.42
refine.correlation coeff fo to fc: 0.979
refine.correlation coeff fo to fc free: 0.961
refine.details: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES: REFINED INDIVIDUALLY
refine.ls r factor r free: 0.153
refine.ls r factor r work: 0.1292
refine.ls r factor obs: 0.1304
refine.ls d res high: 0.85
refine.ls d res low: 33.98
refine.ls number reflns r free: 1212
refine.ls number reflns obs: 23012
refine.ls percent reflns r free: 5
refine.ls percent reflns obs: 99.8
refine.overall SU b: 0.358
refine.overall SU ML: 0.01
refine.overall SU r cruickshank DPI: 0.0154
refine.pdbx r free selection details: RANDOM
refine.pdbx diffrn id: 1
refine.pdbx ls cross valid method: FREE R-VALUE
refine.pdbx ls sigma f: 0
refine.pdbx method to determine struct: AB INITIO PHASING
refine.pdbx overall ESU r: 0.015
refine.pdbx overall ESU r free: 0.017
refine.pdbx solvent ion probe radii: 0.7
refine.pdbx solvent shrinkage radii: 0.7
refine.pdbx solvent vdw probe radii: 1.7

final,X-RAY DIFFRACTION
type: refine hist
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
refine hist.cycle id: final
refine hist.pdbx refine id: X-RAY DIFFRACTION
refine hist.d res high: 0.85
refine hist.d res low: 33.98
refine hist.number atoms solvent: 41
refine hist.number atoms total: 351
refine hist.pdbx b iso mean solvent: 12.89
refine hist.pdbx number atoms ligand: 0
refine hist.pdbx number atoms nucleic acid: 0
refine hist.pdbx number atoms protein: 310
refine hist.pdbx number residues total: 42

X-RAY DIFFRACTION,r bond refined d
type: refine ls restr
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
refine ls restr.pdbx refine id: X-RAY DIFFRACTION
refine ls restr.type: r_bond_refined_d
refine ls restr.dev ideal: 0.013
refine ls restr.dev ideal target: 0.019
refine ls restr.number: 346

X-RAY DIFFRACTION,r bond other d
type: refine ls restr
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
refine ls restr.pdbx refine id: X-RAY DIFFRACTION
refine ls restr.type: r_bond_other_d
refine ls restr.dev ideal: 0.01
refine ls restr.dev ideal target: 0.02
refine ls restr.number: 297

X-RAY DIFFRACTION,r angle refined deg
type: refine ls restr
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
refine ls restr.pdbx refine id: X-RAY DIFFRACTION
refine ls restr.type: r_angle_refined_deg
refine ls restr.dev ideal: 1.813
refine ls restr.dev ideal target: 2.012
refine ls restr.number: 469

X-RAY DIFFRACTION,r angle other deg
type: refine ls restr
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
refine ls restr.pdbx refine id: X-RAY DIFFRACTION
refine ls restr.type: r_angle_other_deg
refine ls restr.dev ideal: 1.792
refine ls restr.dev ideal target: 3
refine ls restr.number: 695

X-RAY DIFFRACTION,r dihedral angle 1 deg
type: refine ls restr
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
refine ls restr.pdbx refine id: X-RAY DIFFRACTION
refine ls restr.type: r_dihedral_angle_1_deg
refine ls restr.dev ideal: 7.74
refine ls restr.dev ideal target: 5
refine ls restr.number: 46

X-RAY DIFFRACTION,r dihedral angle 2 deg
type: refine ls restr
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
refine ls restr.pdbx refine id: X-RAY DIFFRACTION
refine ls restr.type: r_dihedral_angle_2_deg
refine ls restr.dev ideal: 25.339
refine ls restr.dev ideal target: 25.882
refine ls restr.number: 17

X-RAY DIFFRACTION,r dihedral angle 3 deg
type: refine ls restr
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
refine ls restr.pdbx refine id: X-RAY DIFFRACTION
refine ls restr.type: r_dihedral_angle_3_deg
refine ls restr.dev ideal: 10.887
refine ls restr.dev ideal target: 15
refine ls restr.number: 43

X-RAY DIFFRACTION,r chiral restr
type: refine ls restr
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
refine ls restr.pdbx refine id: X-RAY DIFFRACTION
refine ls restr.type: r_chiral_restr
refine ls restr.dev ideal: 0.106
refine ls restr.dev ideal target: 0.2
refine ls restr.number: 43

X-RAY DIFFRACTION,r gen planes refined
type: refine ls restr
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
refine ls restr.pdbx refine id: X-RAY DIFFRACTION
refine ls restr.type: r_gen_planes_refined
refine ls restr.dev ideal: 0.012
refine ls restr.dev ideal target: 0.021
refine ls restr.number: 418

X-RAY DIFFRACTION,r gen planes other
type: refine ls restr
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
refine ls restr.pdbx refine id: X-RAY DIFFRACTION
refine ls restr.type: r_gen_planes_other
refine ls restr.dev ideal: 0.008
refine ls restr.dev ideal target: 0.02
refine ls restr.number: 74

X-RAY DIFFRACTION,r mcbond it
type: refine ls restr
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
refine ls restr.pdbx refine id: X-RAY DIFFRACTION
refine ls restr.type: r_mcbond_it
refine ls restr.dev ideal: 0.608
refine ls restr.dev ideal target: 0.551
refine ls restr.number: 178

X-RAY DIFFRACTION,r mcbond other
type: refine ls restr
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
refine ls restr.pdbx refine id: X-RAY DIFFRACTION
refine ls restr.type: r_mcbond_other
refine ls restr.dev ideal: 0.592
refine ls restr.dev ideal target: 0.541
refine ls restr.number: 175

X-RAY DIFFRACTION,r mcangle it
type: refine ls restr
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
refine ls restr.pdbx refine id: X-RAY DIFFRACTION
refine ls restr.type: r_mcangle_it
refine ls restr.dev ideal: 0.792
refine ls restr.dev ideal target: 0.833
refine ls restr.number: 220

X-RAY DIFFRACTION,r rigid bond restr
type: refine ls restr
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
refine ls restr.pdbx refine id: X-RAY DIFFRACTION
refine ls restr.type: r_rigid_bond_restr
refine ls restr.dev ideal: 2.741
refine ls restr.dev ideal target: 3
refine ls restr.number: 643

X-RAY DIFFRACTION,r sphericity free
type: refine ls restr
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
refine ls restr.pdbx refine id: X-RAY DIFFRACTION
refine ls restr.type: r_sphericity_free
refine ls restr.dev ideal: 17.628
refine ls restr.dev ideal target: 5
refine ls restr.number: 4

X-RAY DIFFRACTION,r sphericity bonded
type: refine ls restr
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
refine ls restr.pdbx refine id: X-RAY DIFFRACTION
refine ls restr.type: r_sphericity_bonded
refine ls restr.dev ideal: 4.197
refine ls restr.dev ideal target: 5
refine ls restr.number: 667

http://rdf.wwpdb.org/pdb/5JQF/refine_ls_restr_ncs/1
type: refine ls restr ncs
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
refine ls restr ncs.pdbx ordinal: 1
refine ls restr ncs.dom id: 1
refine ls restr ncs.pdbx auth asym id: A
refine ls restr ncs.pdbx ens id: 1
refine ls restr ncs.pdbx number: 1806
refine ls restr ncs.pdbx refine id: X-RAY DIFFRACTION
refine ls restr ncs.pdbx type: interatomic distance
refine ls restr ncs.rms dev position: 0.21
refine ls restr ncs.weight position: 0.05

http://rdf.wwpdb.org/pdb/5JQF/refine_ls_restr_ncs/2
type: refine ls restr ncs
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
refine ls restr ncs.pdbx ordinal: 2
refine ls restr ncs.dom id: 2
refine ls restr ncs.pdbx auth asym id: B
refine ls restr ncs.pdbx ens id: 1
refine ls restr ncs.pdbx number: 1806
refine ls restr ncs.pdbx refine id: X-RAY DIFFRACTION
refine ls restr ncs.pdbx type: interatomic distance
refine ls restr ncs.rms dev position: 0.21
refine ls restr ncs.weight position: 0.05

0.85,X-RAY DIFFRACTION
type: refine ls shell
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
refine ls shell.d res high: 0.85
refine ls shell.pdbx refine id: X-RAY DIFFRACTION
refine ls shell.r factor r free: 0.388
refine ls shell.r factor r work: 0.325
refine ls shell.d res low: 0.896
refine ls shell.number reflns r free: 176
refine ls shell.number reflns r work: 3345
refine ls shell.number reflns all: 3521
refine ls shell.pdbx total number of bins used: 10
refine ls shell.percent reflns obs: 99.83

http://rdf.wwpdb.org/pdb/5JQF/reflns/1
type: reflns
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entry: 5JQF
reflns.pdbx ordinal: 1
reflns.b iso wilson estimate: 8.602
reflns.d resolution high: 0.85
reflns.d resolution low: 50
reflns.entry id: 5JQF
reflns.number obs: 24225
reflns.observed criterion sigma i: -3
reflns.pdbx CC half: 0.997
reflns.pdbx rmerge i obs: 0.067
reflns.pdbx diffrn id: 1
reflns.pdbx net i over sigma i: 12.01
reflns.pdbx redundancy: 5
reflns.percent possible obs: 99.8

http://rdf.wwpdb.org/pdb/5JQF/reflns_shell/1
type: reflns shell
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reflns shell.pdbx ordinal: 1
reflns shell.rmerge i obs: 0.689
reflns shell.d res high: 0.85
reflns shell.d res low: 0.9
reflns shell.mean i over sig i obs: 2.2
reflns shell.pdbx diffrn id: 1
reflns shell.percent possible all: 99.6

http://rdf.wwpdb.org/pdb/5JQF/reflns_shell/2
type: reflns shell
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reflns shell.pdbx ordinal: 2
reflns shell.rmerge i obs: 0.388
reflns shell.d res high: 0.9
reflns shell.d res low: 0.96
reflns shell.mean i over sig i obs: 4.05
reflns shell.pdbx diffrn id: 1
reflns shell.percent possible all: 99.9

http://rdf.wwpdb.org/pdb/5JQF/reflns_shell/3
type: reflns shell
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reflns shell.pdbx ordinal: 3
reflns shell.rmerge i obs: 0.194
reflns shell.d res high: 0.96
reflns shell.d res low: 1.04
reflns shell.mean i over sig i obs: 7.82
reflns shell.pdbx diffrn id: 1
reflns shell.percent possible all: 100

http://rdf.wwpdb.org/pdb/5JQF/reflns_shell/4
type: reflns shell
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reflns shell.pdbx ordinal: 4
reflns shell.rmerge i obs: 0.112
reflns shell.d res high: 1.04
reflns shell.d res low: 1.14
reflns shell.mean i over sig i obs: 12.08
reflns shell.pdbx diffrn id: 1
reflns shell.percent possible all: 99.9

http://rdf.wwpdb.org/pdb/5JQF/reflns_shell/5
type: reflns shell
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reflns shell.pdbx ordinal: 5
reflns shell.rmerge i obs: 0.084
reflns shell.d res high: 1.14
reflns shell.d res low: 1.27
reflns shell.mean i over sig i obs: 15.67
reflns shell.pdbx diffrn id: 1
reflns shell.percent possible all: 100

http://rdf.wwpdb.org/pdb/5JQF/reflns_shell/6
type: reflns shell
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reflns shell.pdbx ordinal: 6
reflns shell.rmerge i obs: 0.076
reflns shell.d res high: 1.27
reflns shell.d res low: 1.47
reflns shell.mean i over sig i obs: 17.31
reflns shell.pdbx diffrn id: 1
reflns shell.percent possible all: 100

http://rdf.wwpdb.org/pdb/5JQF/reflns_shell/7
type: reflns shell
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reflns shell.pdbx ordinal: 7
reflns shell.rmerge i obs: 0.062
reflns shell.d res high: 1.47
reflns shell.d res low: 1.8
reflns shell.mean i over sig i obs: 21.54
reflns shell.pdbx diffrn id: 1
reflns shell.percent possible all: 99.5

http://rdf.wwpdb.org/pdb/5JQF/reflns_shell/8
type: reflns shell
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reflns shell.pdbx ordinal: 8
reflns shell.rmerge i obs: 0.052
reflns shell.d res high: 1.8
reflns shell.d res low: 2.54
reflns shell.mean i over sig i obs: 25.35
reflns shell.pdbx diffrn id: 1
reflns shell.percent possible all: 99.5

http://rdf.wwpdb.org/pdb/5JQF/reflns_shell/9
type: reflns shell
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reflns shell.pdbx ordinal: 9
reflns shell.rmerge i obs: 0.052
reflns shell.d res high: 2.54
reflns shell.mean i over sig i obs: 27.04
reflns shell.pdbx diffrn id: 1
reflns shell.percent possible all: 98.5

http://rdf.wwpdb.org/pdb/5JQF/software/1
type: software
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
software.pdbx ordinal: 1
software.classification: refinement
software.name: REFMAC
software.version: 5.8.0135

http://rdf.wwpdb.org/pdb/5JQF/software/2
type: software
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
software.pdbx ordinal: 2
software.classification: model building
software.name: Coot
software.version: 0.8-pre (revision 4727)

http://rdf.wwpdb.org/pdb/5JQF/software/3
type: software
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
software.pdbx ordinal: 3
software.classification: data reduction
software.name: XDS
software.version: Oct 15, 2015

http://rdf.wwpdb.org/pdb/5JQF/software/4
type: software
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
software.pdbx ordinal: 4
software.classification: data scaling
software.name: XSCALE
software.version: Oct 15, 2015

http://rdf.wwpdb.org/pdb/5JQF/software/5
type: software
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
software.pdbx ordinal: 5
software.classification: phasing
software.name: Sir2014
software.version: Sir2014

5JQF
type: struct
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entry: 5JQF
struct.entry id: 5JQF
struct.pdbx CASP flag: N
struct.pdbx descriptor: Sphingopyxin I
struct.title: Crystal structure of the lasso peptide Sphingopyxin I (SpI)

http://rdf.wwpdb.org/pdb/5JQF/struct_asym/C
type: struct asym
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity: http://rdf.wwpdb.org/pdb/5JQF/entity/2
struct asym.id: C
struct asym.entity id: 2
struct asym.pdbx blank PDB chainid flag: N
struct asym.pdbx modified: N

http://rdf.wwpdb.org/pdb/5JQF/struct_asym/D
type: struct asym
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity: http://rdf.wwpdb.org/pdb/5JQF/entity/2
struct asym.id: D
struct asym.entity id: 2
struct asym.pdbx blank PDB chainid flag: N
struct asym.pdbx modified: N

covale1
type: struct conn
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to struct conn type: covale
struct conn.id: covale1
struct conn.conn type id: covale
struct conn.pdbx dist value: 1.31
struct conn.pdbx leaving atom flag: one
struct conn.ptnr1 auth asym id: A
struct conn.ptnr1 auth comp id: GLY
struct conn.ptnr1 auth seq id: 1
struct conn.ptnr1 label asym id: A
struct conn.ptnr1 label atom id: N
struct conn.ptnr1 label comp id: GLY
struct conn.ptnr1 label seq id: 1
struct conn.ptnr1 symmetry: 1_555
struct conn.ptnr2 auth asym id: A
struct conn.ptnr2 auth comp id: ASP
struct conn.ptnr2 auth seq id: 9
struct conn.ptnr2 label asym id: A
struct conn.ptnr2 label atom id: CG
struct conn.ptnr2 label comp id: ASP
struct conn.ptnr2 label seq id: 9
struct conn.ptnr2 symmetry: 1_555

covale
referenced by struct conn: covale1
referenced by struct conn: covale2
type: struct conn type
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
struct conn type.id: covale

covale2
type: struct conn
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to struct conn type: covale
struct conn.id: covale2
struct conn.conn type id: covale
struct conn.pdbx dist value: 1.299
struct conn.pdbx leaving atom flag: one
struct conn.ptnr1 auth asym id: B
struct conn.ptnr1 auth comp id: GLY
struct conn.ptnr1 auth seq id: 1
struct conn.ptnr1 label asym id: B
struct conn.ptnr1 label atom id: N
struct conn.ptnr1 label comp id: GLY
struct conn.ptnr1 label seq id: 1
struct conn.ptnr1 symmetry: 1_555
struct conn.ptnr2 auth asym id: B
struct conn.ptnr2 auth comp id: ASP
struct conn.ptnr2 auth seq id: 9
struct conn.ptnr2 label asym id: B
struct conn.ptnr2 label atom id: CG
struct conn.ptnr2 label comp id: ASP
struct conn.ptnr2 label seq id: 9
struct conn.ptnr2 symmetry: 1_555

5JQF
type: struct keywords
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entry: 5JQF
struct keywords.entry id: 5JQF
struct keywords.pdbx keywords: UNKNOWN FUNCTION
struct keywords.text: Lasso peptide, isopeptide bond, macrolactam ring, unknown function

1,1
type: struct ncs dom
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to struct ncs ens: http://rdf.wwpdb.org/pdb/5JQF/struct_ncs_ens/1
struct ncs dom.id: 1
struct ncs dom.pdbx ens id: 1
struct ncs dom.details: A
referenced by struct ncs dom lim: 1,0,1

http://rdf.wwpdb.org/pdb/5JQF/struct_ncs_ens/1
referenced by struct ncs dom: 1,1
referenced by struct ncs dom: 2,1
type: struct ncs ens
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
struct ncs ens.id: 1

2,1
type: struct ncs dom
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to struct ncs ens: http://rdf.wwpdb.org/pdb/5JQF/struct_ncs_ens/1
struct ncs dom.id: 2
struct ncs dom.pdbx ens id: 1
struct ncs dom.details: B
referenced by struct ncs dom lim: 2,0,1

1,0,1
type: struct ncs dom lim
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to struct ncs dom: 1,1
struct ncs dom lim.dom id: 1
struct ncs dom lim.pdbx component id: 0
struct ncs dom lim.pdbx ens id: 1
struct ncs dom lim.beg auth asym id: A
struct ncs dom lim.beg auth seq id: 1
struct ncs dom lim.end auth asym id: A
struct ncs dom lim.end auth seq id: 21
struct ncs dom lim.pdbx refine code: 0

2,0,1
type: struct ncs dom lim
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to struct ncs dom: 2,1
struct ncs dom lim.dom id: 2
struct ncs dom lim.pdbx component id: 0
struct ncs dom lim.pdbx ens id: 1
struct ncs dom lim.beg auth asym id: B
struct ncs dom lim.beg auth seq id: 1
struct ncs dom lim.end auth asym id: B
struct ncs dom lim.end auth seq id: 21
struct ncs dom lim.pdbx refine code: 0

http://rdf.wwpdb.org/pdb/5JQF/struct_ref/1
type: struct ref
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entity: http://rdf.wwpdb.org/pdb/5JQF/entity/1
struct ref.id: 1
struct ref.db code: 5JQF
struct ref.db name: PDB
struct ref.entity id: 1
struct ref.pdbx align begin: 1
struct ref.pdbx db accession: 5JQF
referenced by struct ref seq: http://rdf.wwpdb.org/pdb/5JQF/struct_ref_seq/2
referenced by struct ref seq: http://rdf.wwpdb.org/pdb/5JQF/struct_ref_seq/1

http://rdf.wwpdb.org/pdb/5JQF/struct_ref_seq/1
type: struct ref seq
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to struct ref: http://rdf.wwpdb.org/pdb/5JQF/struct_ref/1
struct ref seq.align id: 1
struct ref seq.db align beg: 1
struct ref seq.db align end: 21
struct ref seq.pdbx PDB id code: 5JQF
struct ref seq.pdbx auth seq align beg: 1
struct ref seq.pdbx auth seq align end: 21
struct ref seq.pdbx db accession: 5JQF
struct ref seq.pdbx strand id: A
struct ref seq.ref id: 1
struct ref seq.seq align beg: 1
struct ref seq.seq align end: 21

http://rdf.wwpdb.org/pdb/5JQF/struct_ref_seq/2
type: struct ref seq
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to struct ref: http://rdf.wwpdb.org/pdb/5JQF/struct_ref/1
struct ref seq.align id: 2
struct ref seq.db align beg: 1
struct ref seq.db align end: 21
struct ref seq.pdbx PDB id code: 5JQF
struct ref seq.pdbx auth seq align beg: 1
struct ref seq.pdbx auth seq align end: 21
struct ref seq.pdbx db accession: 5JQF
struct ref seq.pdbx strand id: B
struct ref seq.ref id: 1
struct ref seq.seq align beg: 1
struct ref seq.seq align end: 21

1,2,AA1
type: struct sheet order
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to struct sheet: AA1
struct sheet order.range id 1: 1
struct sheet order.range id 2: 2
struct sheet order.sheet id: AA1
struct sheet order.sense: anti-parallel

1,AA1
type: struct sheet range
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to struct sheet: AA1
struct sheet range.id: 1
struct sheet range.sheet id: AA1
struct sheet range.beg auth asym id: A
struct sheet range.beg auth comp id: PHE
struct sheet range.beg auth seq id: 18
struct sheet range.beg label asym id: A
struct sheet range.beg label comp id: PHE
struct sheet range.beg label seq id: 18
struct sheet range.end auth asym id: A
struct sheet range.end auth comp id: GLY
struct sheet range.end auth seq id: 20
struct sheet range.end label asym id: A
struct sheet range.end label comp id: GLY
struct sheet range.end label seq id: 20

2,AA1
type: struct sheet range
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to struct sheet: AA1
struct sheet range.id: 2
struct sheet range.sheet id: AA1
struct sheet range.beg auth asym id: B
struct sheet range.beg auth comp id: PHE
struct sheet range.beg auth seq id: 18
struct sheet range.beg label asym id: B
struct sheet range.beg label comp id: PHE
struct sheet range.beg label seq id: 18
struct sheet range.end auth asym id: B
struct sheet range.end auth comp id: GLY
struct sheet range.end auth seq id: 20
struct sheet range.end label asym id: B
struct sheet range.end label comp id: GLY
struct sheet range.end label seq id: 20

5JQF
type: symmetry
of datablock: Crystal structure of the lasso peptide Sphingopyxin I (SpI)
reference to entry: 5JQF
symmetry.entry id: 5JQF
symmetry.int tables number: 170
symmetry.space group name H-M: P 65