Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
type: datablock
alternative label: 2KNK
link to mmcif: 2KNK.cif.gz
link to pdbml: 2KNK.xml.gz
link to pdbml noatom: 2KNK-noatom.xml.gz
link to pdbml extatom: 2KNK-extatom.xml.gz
link to doi: doi:10.2210/pdb2KNK/pdb
datablock name: 2KNK-noatom
has atom sites category: atom sitesCategory
has atom type category: atom typeCategory
has audit author category: audit authorCategory
has audit conform category: audit conformCategory
has chem comp category: chem compCategory
has citation category: citationCategory
has citation author category: citation authorCategory
has database 2 category: database 2Category
has entity category: entityCategory
has entity poly category: entity polyCategory
has entity poly seq category: entity poly seqCategory
has entry category: entryCategory
has exptl category: exptlCategory
has ndb struct conf na category: ndb struct conf naCategory
has ndb struct na base pair category: ndb struct na base pairCategory
has ndb struct na base pair step category: ndb struct na base pair stepCategory
has pdbx audit revision category category: pdbx audit revision categoryCategory
has pdbx audit revision details category: pdbx audit revision detailsCategory
has pdbx audit revision group category: pdbx audit revision groupCategory
has pdbx audit revision history category: pdbx audit revision historyCategory
has pdbx audit revision item category: pdbx audit revision itemCategory
has pdbx database related category: pdbx database relatedCategory
has pdbx database status category: pdbx database statusCategory
has pdbx entity nonpoly category: pdbx entity nonpolyCategory
has pdbx nmr ensemble category: pdbx nmr ensembleCategory
has pdbx nmr exptl category: pdbx nmr exptlCategory
has pdbx nmr exptl sample category: pdbx nmr exptl sampleCategory
has pdbx nmr exptl sample conditions category: pdbx nmr exptl sample conditionsCategory
has pdbx nmr refine category: pdbx nmr refineCategory
has pdbx nmr representative category: pdbx nmr representativeCategory
has pdbx nmr sample details category: pdbx nmr sample detailsCategory
has pdbx nmr software category: pdbx nmr softwareCategory
has pdbx nmr spectrometer category: pdbx nmr spectrometerCategory
has pdbx nonpoly scheme category: pdbx nonpoly schemeCategory
has pdbx poly seq scheme category: pdbx poly seq schemeCategory
has pdbx struct assembly category: pdbx struct assemblyCategory
has pdbx struct assembly gen category: pdbx struct assembly genCategory
has pdbx struct oper list category: pdbx struct oper listCategory
has pdbx validate planes category: pdbx validate planesCategory
has pdbx validate rmsd angle category: pdbx validate rmsd angleCategory
has struct category: structCategory
has struct asym category: struct asymCategory
has struct biol category: struct biolCategory
has struct conn category: struct connCategory
has struct conn type category: struct conn typeCategory
has struct keywords category: struct keywordsCategory
has struct ref category: struct refCategory
has struct ref seq category: struct ref seqCategory
has struct site category: struct siteCategory
has struct site gen category: struct site genCategory

2KNK
type: atom sites
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to entry: 2KNK
atom sites.entry id: 2KNK
atom sites.fract transf matrix11: 1
atom sites.fract transf matrix12: 0
atom sites.fract transf matrix13: 0
atom sites.fract transf matrix21: 0
atom sites.fract transf matrix22: 1
atom sites.fract transf matrix23: 0
atom sites.fract transf matrix31: 0
atom sites.fract transf matrix32: 0
atom sites.fract transf matrix33: 1
atom sites.fract transf vector1: 0
atom sites.fract transf vector2: 0
atom sites.fract transf vector3: 0

2KNK
referenced by atom sites: 2KNK
type: entry
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
entry.id: 2KNK
referenced by exptl: 2KNK,SOLUTION NMR
referenced by struct: 2KNK
referenced by struct keywords: 2KNK
referenced by pdbx database status: 2KNK
referenced by pdbx nmr ensemble: 2KNK
referenced by pdbx nmr representative: 2KNK
referenced by pdbx nmr refine: 2KNK,1
referenced by ndb struct conf na: 2KNK,b-form double helix
referenced by ndb struct conf na: 2KNK,double helix

http://rdf.wwpdb.org/pdb/2KNK/atom_type/C
type: atom type
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
atom type.symbol: C

http://rdf.wwpdb.org/pdb/2KNK/atom_type/H
type: atom type
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
atom type.symbol: H

http://rdf.wwpdb.org/pdb/2KNK/atom_type/N
type: atom type
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
atom type.symbol: N

http://rdf.wwpdb.org/pdb/2KNK/atom_type/O
type: atom type
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
atom type.symbol: O

http://rdf.wwpdb.org/pdb/2KNK/atom_type/P
type: atom type
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
atom type.symbol: P

http://rdf.wwpdb.org/pdb/2KNK/audit_author/1
type: audit author
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
audit author.pdbx ordinal: 1
audit author.name: Huang, H.

http://rdf.wwpdb.org/pdb/2KNK/audit_author/2
type: audit author
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
audit author.pdbx ordinal: 2
audit author.name: Dooley, P.A.

http://rdf.wwpdb.org/pdb/2KNK/audit_author/3
type: audit author
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
audit author.pdbx ordinal: 3
audit author.name: Harris, C.M.

http://rdf.wwpdb.org/pdb/2KNK/audit_author/4
type: audit author
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
audit author.pdbx ordinal: 4
audit author.name: Harris, T.M.

http://rdf.wwpdb.org/pdb/2KNK/audit_author/5
type: audit author
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
audit author.pdbx ordinal: 5
audit author.name: Stone, M.P.

mmcif pdbx.dic,5.356
type: audit conform
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
audit conform.dict name: mmcif_pdbx.dic
audit conform.dict version: 5.356
audit conform.dict location: http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic

DA
type: chem comp
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
chem comp.id: DA
chem comp.formula: C10 H14 N5 O6 P
chem comp.formula weight: 331.222
chem comp.mon nstd flag: y
chem comp.name: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
chem comp.type: DNA linking
link to chem comp: DA
referenced by entity poly seq: 1,DA,1

DC
type: chem comp
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
chem comp.id: DC
chem comp.formula: C9 H14 N3 O7 P
chem comp.formula weight: 307.197
chem comp.mon nstd flag: y
chem comp.name: 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
chem comp.type: DNA linking
link to chem comp: DC
referenced by entity poly seq: 1,DC,7
referenced by entity poly seq: 1,DC,4
referenced by entity poly seq: 1,DC,6

DG
type: chem comp
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
chem comp.id: DG
chem comp.formula: C10 H14 N5 O7 P
chem comp.formula weight: 347.221
chem comp.mon nstd flag: y
chem comp.name: 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
chem comp.type: DNA linking
link to chem comp: DG
referenced by entity poly seq: 1,DG,5
referenced by entity poly seq: 1,DG,2
referenced by entity poly seq: 1,DG,3

DT
type: chem comp
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
chem comp.id: DT
chem comp.formula: C10 H15 N2 O8 P
chem comp.formula weight: 322.208
chem comp.mon nstd flag: y
chem comp.name: THYMIDINE-5'-MONOPHOSPHATE
chem comp.type: DNA linking
link to chem comp: DT
referenced by entity poly seq: 1,DT,8

TME
type: chem comp
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
chem comp.id: TME
chem comp.formula: C3 H8
chem comp.formula weight: 44.096
chem comp.name: PROPANE
chem comp.type: non-polymer
link to chem comp: TME

primary
type: citation
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
citation.id: primary
citation.country: US
citation.journal abbrev: Chem.Res.Toxicol.
citation.journal id ASTM: CRTOEC
citation.journal id CSD: 2140
citation.journal id ISSN: 0893-228X
citation.journal volume: 22
citation.page first: 1810
citation.page last: 1816
citation.pdbx database id DOI: 10.1021/tx900225c
citation.pdbx database id pub med: 19916525
citation.title: Differential base stacking interactions induced by trimethylene interstrand DNA cross-links in the 5'-CpG-3' and 5'-GpC-3' sequence contexts.
citation.year: 2009
link to doi: doi:10.1021/tx900225c
link to pubmed: pubmed:19916525
references: pubmed:19916525
referenced by citation author: primary,Stone, M.P.,5
referenced by citation author: primary,Huang, H.,1
referenced by citation author: primary,Dooley, P.A.,2
referenced by citation author: primary,Harris, C.M.,3
referenced by citation author: primary,Harris, T.M.,4

primary,Huang, H.,1
type: citation author
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to citation: primary
citation author.citation id: primary
citation author.name: Huang, H.
citation author.ordinal: 1

primary,Dooley, P.A.,2
type: citation author
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to citation: primary
citation author.citation id: primary
citation author.name: Dooley, P.A.
citation author.ordinal: 2

primary,Harris, C.M.,3
type: citation author
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to citation: primary
citation author.citation id: primary
citation author.name: Harris, C.M.
citation author.ordinal: 3

primary,Harris, T.M.,4
type: citation author
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to citation: primary
citation author.citation id: primary
citation author.name: Harris, T.M.
citation author.ordinal: 4

primary,Stone, M.P.,5
type: citation author
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to citation: primary
citation author.citation id: primary
citation author.name: Stone, M.P.
citation author.ordinal: 5

2KNK,PDB
type: database 2
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
database 2.database code: 2KNK
database 2.database id: PDB
database 2.pdbx DOI: 10.2210/pdb2knk/pdb
database 2.pdbx database accession: pdb_00002knk

RCSB101342,RCSB
type: database 2
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
database 2.database code: RCSB101342
database 2.database id: RCSB

D 1000101342,WWPDB
type: database 2
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
database 2.database code: D_1000101342
database 2.database id: WWPDB

http://rdf.wwpdb.org/pdb/2KNK/entity/1
type: entity
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
entity.id: 1
entity.formula weight: 2427.605
entity.pdbx description: DNA (5'-D(*AP*GP*GP*CP*GP*CP*CP*T)-3')
entity.pdbx number of molecules: 2
entity.src method: syn
entity.type: polymer
referenced by entity poly: http://rdf.wwpdb.org/pdb/2KNK/entity_poly/1
referenced by struct asym: http://rdf.wwpdb.org/pdb/2KNK/struct_asym/B
referenced by struct ref: http://rdf.wwpdb.org/pdb/2KNK/struct_ref/1
referenced by struct asym: http://rdf.wwpdb.org/pdb/2KNK/struct_asym/A

http://rdf.wwpdb.org/pdb/2KNK/entity/2
type: entity
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
entity.id: 2
entity.formula weight: 44.096
entity.pdbx description: PROPANE
entity.pdbx number of molecules: 1
entity.src method: syn
entity.type: non-polymer
referenced by struct asym: http://rdf.wwpdb.org/pdb/2KNK/struct_asym/C
referenced by pdbx entity nonpoly: http://rdf.wwpdb.org/pdb/2KNK/pdbx_entity_nonpoly/2

http://rdf.wwpdb.org/pdb/2KNK/entity_poly/1
type: entity poly
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to entity: http://rdf.wwpdb.org/pdb/2KNK/entity/1
entity poly.entity id: 1
entity poly.nstd linkage: no
entity poly.nstd monomer: no
entity poly.pdbx seq one letter code: (DA)(DG)(DG)(DC)(DG)(DC)(DC)(DT)
entity poly.pdbx seq one letter code can: AGGCGCCT
entity poly.pdbx strand id: A,B
entity poly.type: polydeoxyribonucleotide
referenced by entity poly seq: 1,DT,8
referenced by entity poly seq: 1,DA,1
referenced by entity poly seq: 1,DG,2
referenced by entity poly seq: 1,DG,3
referenced by entity poly seq: 1,DC,4
referenced by entity poly seq: 1,DG,5
referenced by entity poly seq: 1,DC,6
referenced by entity poly seq: 1,DC,7

1,DA,1
type: entity poly seq
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to chem comp: DA
reference to entity poly: http://rdf.wwpdb.org/pdb/2KNK/entity_poly/1
entity poly seq.entity id: 1
entity poly seq.mon id: DA
entity poly seq.num: 1
entity poly seq.hetero: n
referenced by pdbx poly seq scheme: B,1,DA,1
referenced by pdbx poly seq scheme: A,1,DA,1

1,DG,2
type: entity poly seq
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to chem comp: DG
reference to entity poly: http://rdf.wwpdb.org/pdb/2KNK/entity_poly/1
entity poly seq.entity id: 1
entity poly seq.mon id: DG
entity poly seq.num: 2
entity poly seq.hetero: n
referenced by pdbx poly seq scheme: B,1,DG,2
referenced by pdbx poly seq scheme: A,1,DG,2

1,DG,3
type: entity poly seq
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to chem comp: DG
reference to entity poly: http://rdf.wwpdb.org/pdb/2KNK/entity_poly/1
entity poly seq.entity id: 1
entity poly seq.mon id: DG
entity poly seq.num: 3
entity poly seq.hetero: n
referenced by pdbx poly seq scheme: B,1,DG,3
referenced by pdbx poly seq scheme: A,1,DG,3

1,DC,4
type: entity poly seq
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to chem comp: DC
reference to entity poly: http://rdf.wwpdb.org/pdb/2KNK/entity_poly/1
entity poly seq.entity id: 1
entity poly seq.mon id: DC
entity poly seq.num: 4
entity poly seq.hetero: n
referenced by pdbx poly seq scheme: B,1,DC,4
referenced by pdbx poly seq scheme: A,1,DC,4

1,DG,5
type: entity poly seq
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to chem comp: DG
reference to entity poly: http://rdf.wwpdb.org/pdb/2KNK/entity_poly/1
entity poly seq.entity id: 1
entity poly seq.mon id: DG
entity poly seq.num: 5
entity poly seq.hetero: n
referenced by pdbx poly seq scheme: B,1,DG,5
referenced by pdbx poly seq scheme: A,1,DG,5

1,DC,6
type: entity poly seq
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to chem comp: DC
reference to entity poly: http://rdf.wwpdb.org/pdb/2KNK/entity_poly/1
entity poly seq.entity id: 1
entity poly seq.mon id: DC
entity poly seq.num: 6
entity poly seq.hetero: n
referenced by pdbx poly seq scheme: B,1,DC,6
referenced by pdbx poly seq scheme: A,1,DC,6

1,DC,7
type: entity poly seq
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to chem comp: DC
reference to entity poly: http://rdf.wwpdb.org/pdb/2KNK/entity_poly/1
entity poly seq.entity id: 1
entity poly seq.mon id: DC
entity poly seq.num: 7
entity poly seq.hetero: n
referenced by pdbx poly seq scheme: B,1,DC,7
referenced by pdbx poly seq scheme: A,1,DC,7

1,DT,8
type: entity poly seq
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to chem comp: DT
reference to entity poly: http://rdf.wwpdb.org/pdb/2KNK/entity_poly/1
entity poly seq.entity id: 1
entity poly seq.mon id: DT
entity poly seq.num: 8
entity poly seq.hetero: n
referenced by pdbx poly seq scheme: B,1,DT,8
referenced by pdbx poly seq scheme: A,1,DT,8

2KNK,SOLUTION NMR
type: exptl
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to entry: 2KNK
exptl.entry id: 2KNK
exptl.method: SOLUTION NMR

2KNK,double helix
type: ndb struct conf na
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to entry: 2KNK
ndb struct conf na.entry id: 2KNK
ndb struct conf na.feature: double helix

2KNK,b-form double helix
type: ndb struct conf na
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to entry: 2KNK
ndb struct conf na.entry id: 2KNK
ndb struct conf na.feature: b-form double helix

A,DA,1,1 555,B,DT,8,1 555,1
type: ndb struct na base pair
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
ndb struct na base pair.i label asym id: A
ndb struct na base pair.i label comp id: DA
ndb struct na base pair.i label seq id: 1
ndb struct na base pair.i symmetry: 1_555
ndb struct na base pair.j label asym id: B
ndb struct na base pair.j label comp id: DT
ndb struct na base pair.j label seq id: 8
ndb struct na base pair.j symmetry: 1_555
ndb struct na base pair.model number: 1
ndb struct na base pair.buckle: -10.703
ndb struct na base pair.hbond type 12: 1
ndb struct na base pair.hbond type 28: 20
ndb struct na base pair.i auth asym id: A
ndb struct na base pair.i auth seq id: 1
ndb struct na base pair.j auth asym id: B
ndb struct na base pair.j auth seq id: 16
ndb struct na base pair.opening: 3.232
ndb struct na base pair.pair name: A_DA1:DT16_B
ndb struct na base pair.pair number: 1
ndb struct na base pair.propeller: 2.847
ndb struct na base pair.shear: 0.199
ndb struct na base pair.stagger: -0.142
ndb struct na base pair.stretch: 0.036

A,DG,2,1 555,B,DC,7,1 555,1
type: ndb struct na base pair
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
ndb struct na base pair.i label asym id: A
ndb struct na base pair.i label comp id: DG
ndb struct na base pair.i label seq id: 2
ndb struct na base pair.i symmetry: 1_555
ndb struct na base pair.j label asym id: B
ndb struct na base pair.j label comp id: DC
ndb struct na base pair.j label seq id: 7
ndb struct na base pair.j symmetry: 1_555
ndb struct na base pair.model number: 1
ndb struct na base pair.buckle: 6.548
ndb struct na base pair.hbond type 12: 1
ndb struct na base pair.hbond type 28: 19
ndb struct na base pair.i auth asym id: A
ndb struct na base pair.i auth seq id: 2
ndb struct na base pair.j auth asym id: B
ndb struct na base pair.j auth seq id: 15
ndb struct na base pair.opening: -0.22
ndb struct na base pair.pair name: A_DG2:DC15_B
ndb struct na base pair.pair number: 2
ndb struct na base pair.propeller: -8.26
ndb struct na base pair.shear: -0.427
ndb struct na base pair.stagger: 0.351
ndb struct na base pair.stretch: -0.119

A,DG,3,1 555,B,DC,6,1 555,1
type: ndb struct na base pair
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
ndb struct na base pair.i label asym id: A
ndb struct na base pair.i label comp id: DG
ndb struct na base pair.i label seq id: 3
ndb struct na base pair.i symmetry: 1_555
ndb struct na base pair.j label asym id: B
ndb struct na base pair.j label comp id: DC
ndb struct na base pair.j label seq id: 6
ndb struct na base pair.j symmetry: 1_555
ndb struct na base pair.model number: 1
ndb struct na base pair.buckle: -0.242
ndb struct na base pair.hbond type 12: 1
ndb struct na base pair.hbond type 28: 19
ndb struct na base pair.i auth asym id: A
ndb struct na base pair.i auth seq id: 3
ndb struct na base pair.j auth asym id: B
ndb struct na base pair.j auth seq id: 14
ndb struct na base pair.opening: 0.491
ndb struct na base pair.pair name: A_DG3:DC14_B
ndb struct na base pair.pair number: 3
ndb struct na base pair.propeller: -17.97
ndb struct na base pair.shear: -0.48
ndb struct na base pair.stagger: 0.086
ndb struct na base pair.stretch: -0.124

A,DC,4,1 555,B,DG,5,1 555,1
type: ndb struct na base pair
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
ndb struct na base pair.i label asym id: A
ndb struct na base pair.i label comp id: DC
ndb struct na base pair.i label seq id: 4
ndb struct na base pair.i symmetry: 1_555
ndb struct na base pair.j label asym id: B
ndb struct na base pair.j label comp id: DG
ndb struct na base pair.j label seq id: 5
ndb struct na base pair.j symmetry: 1_555
ndb struct na base pair.model number: 1
ndb struct na base pair.buckle: -8.413
ndb struct na base pair.hbond type 12: 1
ndb struct na base pair.hbond type 28: 19
ndb struct na base pair.i auth asym id: A
ndb struct na base pair.i auth seq id: 4
ndb struct na base pair.j auth asym id: B
ndb struct na base pair.j auth seq id: 13
ndb struct na base pair.opening: -2.742
ndb struct na base pair.pair name: A_DC4:DG13_B
ndb struct na base pair.pair number: 4
ndb struct na base pair.propeller: -7.832
ndb struct na base pair.shear: 0.451
ndb struct na base pair.stagger: 0.189
ndb struct na base pair.stretch: -0.106

A,DG,5,1 555,B,DC,4,1 555,1
type: ndb struct na base pair
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
ndb struct na base pair.i label asym id: A
ndb struct na base pair.i label comp id: DG
ndb struct na base pair.i label seq id: 5
ndb struct na base pair.i symmetry: 1_555
ndb struct na base pair.j label asym id: B
ndb struct na base pair.j label comp id: DC
ndb struct na base pair.j label seq id: 4
ndb struct na base pair.j symmetry: 1_555
ndb struct na base pair.model number: 1
ndb struct na base pair.buckle: 14.346
ndb struct na base pair.hbond type 12: 1
ndb struct na base pair.hbond type 28: 19
ndb struct na base pair.i auth asym id: A
ndb struct na base pair.i auth seq id: 5
ndb struct na base pair.j auth asym id: B
ndb struct na base pair.j auth seq id: 12
ndb struct na base pair.opening: -2.131
ndb struct na base pair.pair name: A_DG5:DC12_B
ndb struct na base pair.pair number: 5
ndb struct na base pair.propeller: -6.028
ndb struct na base pair.shear: -0.471
ndb struct na base pair.stagger: 0.245
ndb struct na base pair.stretch: -0.097

A,DC,6,1 555,B,DG,3,1 555,1
type: ndb struct na base pair
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
ndb struct na base pair.i label asym id: A
ndb struct na base pair.i label comp id: DC
ndb struct na base pair.i label seq id: 6
ndb struct na base pair.i symmetry: 1_555
ndb struct na base pair.j label asym id: B
ndb struct na base pair.j label comp id: DG
ndb struct na base pair.j label seq id: 3
ndb struct na base pair.j symmetry: 1_555
ndb struct na base pair.model number: 1
ndb struct na base pair.buckle: 6.264
ndb struct na base pair.hbond type 12: 1
ndb struct na base pair.hbond type 28: 19
ndb struct na base pair.i auth asym id: A
ndb struct na base pair.i auth seq id: 6
ndb struct na base pair.j auth asym id: B
ndb struct na base pair.j auth seq id: 11
ndb struct na base pair.opening: 0.361
ndb struct na base pair.pair name: A_DC6:DG11_B
ndb struct na base pair.pair number: 6
ndb struct na base pair.propeller: -21.047
ndb struct na base pair.shear: 0.417
ndb struct na base pair.stagger: 0.009
ndb struct na base pair.stretch: -0.135

A,DC,7,1 555,B,DG,2,1 555,1
type: ndb struct na base pair
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
ndb struct na base pair.i label asym id: A
ndb struct na base pair.i label comp id: DC
ndb struct na base pair.i label seq id: 7
ndb struct na base pair.i symmetry: 1_555
ndb struct na base pair.j label asym id: B
ndb struct na base pair.j label comp id: DG
ndb struct na base pair.j label seq id: 2
ndb struct na base pair.j symmetry: 1_555
ndb struct na base pair.model number: 1
ndb struct na base pair.buckle: -4.767
ndb struct na base pair.hbond type 12: 1
ndb struct na base pair.hbond type 28: 19
ndb struct na base pair.i auth asym id: A
ndb struct na base pair.i auth seq id: 7
ndb struct na base pair.j auth asym id: B
ndb struct na base pair.j auth seq id: 10
ndb struct na base pair.opening: -0.697
ndb struct na base pair.pair name: A_DC7:DG10_B
ndb struct na base pair.pair number: 7
ndb struct na base pair.propeller: -10.067
ndb struct na base pair.shear: 0.411
ndb struct na base pair.stagger: 0.328
ndb struct na base pair.stretch: -0.138

A,DT,8,1 555,B,DA,1,1 555,1
type: ndb struct na base pair
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
ndb struct na base pair.i label asym id: A
ndb struct na base pair.i label comp id: DT
ndb struct na base pair.i label seq id: 8
ndb struct na base pair.i symmetry: 1_555
ndb struct na base pair.j label asym id: B
ndb struct na base pair.j label comp id: DA
ndb struct na base pair.j label seq id: 1
ndb struct na base pair.j symmetry: 1_555
ndb struct na base pair.model number: 1
ndb struct na base pair.buckle: 12.367
ndb struct na base pair.hbond type 12: 1
ndb struct na base pair.hbond type 28: 20
ndb struct na base pair.i auth asym id: A
ndb struct na base pair.i auth seq id: 8
ndb struct na base pair.j auth asym id: B
ndb struct na base pair.j auth seq id: 9
ndb struct na base pair.opening: 1.578
ndb struct na base pair.pair name: A_DT8:DA9_B
ndb struct na base pair.pair number: 8
ndb struct na base pair.propeller: -0.886
ndb struct na base pair.shear: -0.143
ndb struct na base pair.stagger: -0.236
ndb struct na base pair.stretch: 0.038

A,A,DA,DG,1,2,1 555,1 555,B,B,DT,DC,8,7,1 555,1 555,1
type: ndb struct na base pair step
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
ndb struct na base pair step.i label asym id 1: A
ndb struct na base pair step.i label asym id 2: A
ndb struct na base pair step.i label comp id 1: DA
ndb struct na base pair step.i label comp id 2: DG
ndb struct na base pair step.i label seq id 1: 1
ndb struct na base pair step.i label seq id 2: 2
ndb struct na base pair step.i symmetry 1: 1_555
ndb struct na base pair step.i symmetry 2: 1_555
ndb struct na base pair step.j label asym id 1: B
ndb struct na base pair step.j label asym id 2: B
ndb struct na base pair step.j label comp id 1: DT
ndb struct na base pair step.j label comp id 2: DC
ndb struct na base pair step.j label seq id 1: 8
ndb struct na base pair step.j label seq id 2: 7
ndb struct na base pair step.j symmetry 1: 1_555
ndb struct na base pair step.j symmetry 2: 1_555
ndb struct na base pair step.model number: 1
ndb struct na base pair step.helical rise: 3.079
ndb struct na base pair step.helical twist: 25.407
ndb struct na base pair step.i auth asym id 1: A
ndb struct na base pair step.i auth asym id 2: A
ndb struct na base pair step.i auth seq id 1: 1
ndb struct na base pair step.i auth seq id 2: 2
ndb struct na base pair step.inclination: -0.909
ndb struct na base pair step.j auth asym id 1: B
ndb struct na base pair step.j auth asym id 2: B
ndb struct na base pair step.j auth seq id 1: 16
ndb struct na base pair step.j auth seq id 2: 15
ndb struct na base pair step.rise: 3.119
ndb struct na base pair step.roll: -0.398
ndb struct na base pair step.shift: -0.065
ndb struct na base pair step.slide: 0.584
ndb struct na base pair step.step name: AA_DA1DG2:DC15DT16_BB
ndb struct na base pair step.step number: 1
ndb struct na base pair step.tilt: -4.172
ndb struct na base pair step.tip: 9.528
ndb struct na base pair step.twist: 25.064
ndb struct na base pair step.x displacement: 1.438
ndb struct na base pair step.y displacement: -0.999

A,A,DG,DG,2,3,1 555,1 555,B,B,DC,DC,7,6,1 555,1 555,1
type: ndb struct na base pair step
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
ndb struct na base pair step.i label asym id 1: A
ndb struct na base pair step.i label asym id 2: A
ndb struct na base pair step.i label comp id 1: DG
ndb struct na base pair step.i label comp id 2: DG
ndb struct na base pair step.i label seq id 1: 2
ndb struct na base pair step.i label seq id 2: 3
ndb struct na base pair step.i symmetry 1: 1_555
ndb struct na base pair step.i symmetry 2: 1_555
ndb struct na base pair step.j label asym id 1: B
ndb struct na base pair step.j label asym id 2: B
ndb struct na base pair step.j label comp id 1: DC
ndb struct na base pair step.j label comp id 2: DC
ndb struct na base pair step.j label seq id 1: 7
ndb struct na base pair step.j label seq id 2: 6
ndb struct na base pair step.j symmetry 1: 1_555
ndb struct na base pair step.j symmetry 2: 1_555
ndb struct na base pair step.model number: 1
ndb struct na base pair step.helical rise: 3.461
ndb struct na base pair step.helical twist: 37.502
ndb struct na base pair step.i auth asym id 1: A
ndb struct na base pair step.i auth asym id 2: A
ndb struct na base pair step.i auth seq id 1: 2
ndb struct na base pair step.i auth seq id 2: 3
ndb struct na base pair step.inclination: 3.273
ndb struct na base pair step.j auth asym id 1: B
ndb struct na base pair step.j auth asym id 2: B
ndb struct na base pair step.j auth seq id 1: 15
ndb struct na base pair step.j auth seq id 2: 14
ndb struct na base pair step.rise: 3.507
ndb struct na base pair step.roll: 2.103
ndb struct na base pair step.shift: -0.354
ndb struct na base pair step.slide: -0.56
ndb struct na base pair step.step name: AA_DG2DG3:DC14DC15_BB
ndb struct na base pair step.step number: 2
ndb struct na base pair step.tilt: 1.028
ndb struct na base pair step.tip: -1.6
ndb struct na base pair step.twist: 37.432
ndb struct na base pair step.x displacement: -1.164
ndb struct na base pair step.y displacement: 0.694

A,A,DG,DC,3,4,1 555,1 555,B,B,DC,DG,6,5,1 555,1 555,1
type: ndb struct na base pair step
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
ndb struct na base pair step.i label asym id 1: A
ndb struct na base pair step.i label asym id 2: A
ndb struct na base pair step.i label comp id 1: DG
ndb struct na base pair step.i label comp id 2: DC
ndb struct na base pair step.i label seq id 1: 3
ndb struct na base pair step.i label seq id 2: 4
ndb struct na base pair step.i symmetry 1: 1_555
ndb struct na base pair step.i symmetry 2: 1_555
ndb struct na base pair step.j label asym id 1: B
ndb struct na base pair step.j label asym id 2: B
ndb struct na base pair step.j label comp id 1: DC
ndb struct na base pair step.j label comp id 2: DG
ndb struct na base pair step.j label seq id 1: 6
ndb struct na base pair step.j label seq id 2: 5
ndb struct na base pair step.j symmetry 1: 1_555
ndb struct na base pair step.j symmetry 2: 1_555
ndb struct na base pair step.model number: 1
ndb struct na base pair step.helical rise: 3.47
ndb struct na base pair step.helical twist: 41.483
ndb struct na base pair step.i auth asym id 1: A
ndb struct na base pair step.i auth asym id 2: A
ndb struct na base pair step.i auth seq id 1: 3
ndb struct na base pair step.i auth seq id 2: 4
ndb struct na base pair step.inclination: -4.335
ndb struct na base pair step.j auth asym id 1: B
ndb struct na base pair step.j auth asym id 2: B
ndb struct na base pair step.j auth seq id 1: 14
ndb struct na base pair step.j auth seq id 2: 13
ndb struct na base pair step.rise: 3.481
ndb struct na base pair step.roll: -3.067
ndb struct na base pair step.shift: 0.405
ndb struct na base pair step.slide: -0.134
ndb struct na base pair step.step name: AA_DG3DC4:DG13DC14_BB
ndb struct na base pair step.step number: 3
ndb struct na base pair step.tilt: -1.196
ndb struct na base pair step.tip: 1.691
ndb struct na base pair step.twist: 41.358
ndb struct na base pair step.x displacement: 0.158
ndb struct na base pair step.y displacement: -0.707

A,A,DC,DG,4,5,1 555,1 555,B,B,DG,DC,5,4,1 555,1 555,1
type: ndb struct na base pair step
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
ndb struct na base pair step.i label asym id 1: A
ndb struct na base pair step.i label asym id 2: A
ndb struct na base pair step.i label comp id 1: DC
ndb struct na base pair step.i label comp id 2: DG
ndb struct na base pair step.i label seq id 1: 4
ndb struct na base pair step.i label seq id 2: 5
ndb struct na base pair step.i symmetry 1: 1_555
ndb struct na base pair step.i symmetry 2: 1_555
ndb struct na base pair step.j label asym id 1: B
ndb struct na base pair step.j label asym id 2: B
ndb struct na base pair step.j label comp id 1: DG
ndb struct na base pair step.j label comp id 2: DC
ndb struct na base pair step.j label seq id 1: 5
ndb struct na base pair step.j label seq id 2: 4
ndb struct na base pair step.j symmetry 1: 1_555
ndb struct na base pair step.j symmetry 2: 1_555
ndb struct na base pair step.model number: 1
ndb struct na base pair step.helical rise: 1.526
ndb struct na base pair step.helical twist: 13.618
ndb struct na base pair step.i auth asym id 1: A
ndb struct na base pair step.i auth asym id 2: A
ndb struct na base pair step.i auth seq id 1: 4
ndb struct na base pair step.i auth seq id 2: 5
ndb struct na base pair step.inclination: 49.797
ndb struct na base pair step.j auth asym id 1: B
ndb struct na base pair step.j auth asym id 2: B
ndb struct na base pair step.j auth seq id 1: 13
ndb struct na base pair step.j auth seq id 2: 12
ndb struct na base pair step.rise: 2.757
ndb struct na base pair step.roll: 10.389
ndb struct na base pair step.shift: 0.031
ndb struct na base pair step.slide: -0.34
ndb struct na base pair step.step name: AA_DC4DG5:DC12DG13_BB
ndb struct na base pair step.step number: 4
ndb struct na base pair step.tilt: -0.313
ndb struct na base pair step.tip: 1.501
ndb struct na base pair step.twist: 8.81
ndb struct na base pair step.x displacement: -9.781
ndb struct na base pair step.y displacement: -0.384

A,A,DG,DC,5,6,1 555,1 555,B,B,DC,DG,4,3,1 555,1 555,1
type: ndb struct na base pair step
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
ndb struct na base pair step.i label asym id 1: A
ndb struct na base pair step.i label asym id 2: A
ndb struct na base pair step.i label comp id 1: DG
ndb struct na base pair step.i label comp id 2: DC
ndb struct na base pair step.i label seq id 1: 5
ndb struct na base pair step.i label seq id 2: 6
ndb struct na base pair step.i symmetry 1: 1_555
ndb struct na base pair step.i symmetry 2: 1_555
ndb struct na base pair step.j label asym id 1: B
ndb struct na base pair step.j label asym id 2: B
ndb struct na base pair step.j label comp id 1: DC
ndb struct na base pair step.j label comp id 2: DG
ndb struct na base pair step.j label seq id 1: 4
ndb struct na base pair step.j label seq id 2: 3
ndb struct na base pair step.j symmetry 1: 1_555
ndb struct na base pair step.j symmetry 2: 1_555
ndb struct na base pair step.model number: 1
ndb struct na base pair step.helical rise: 3.482
ndb struct na base pair step.helical twist: 41.975
ndb struct na base pair step.i auth asym id 1: A
ndb struct na base pair step.i auth asym id 2: A
ndb struct na base pair step.i auth seq id 1: 5
ndb struct na base pair step.i auth seq id 2: 6
ndb struct na base pair step.inclination: -2.386
ndb struct na base pair step.j auth asym id 1: B
ndb struct na base pair step.j auth asym id 2: B
ndb struct na base pair step.j auth seq id 1: 12
ndb struct na base pair step.j auth seq id 2: 11
ndb struct na base pair step.rise: 3.486
ndb struct na base pair step.roll: -1.708
ndb struct na base pair step.shift: -0.3
ndb struct na base pair step.slide: -0.311
ndb struct na base pair step.step name: AA_DG5DC6:DG11DC12_BB
ndb struct na base pair step.step number: 5
ndb struct na base pair step.tilt: 1.578
ndb struct na base pair step.tip: -2.203
ndb struct na base pair step.twist: 41.914
ndb struct na base pair step.x displacement: -0.246
ndb struct na base pair step.y displacement: 0.594

A,A,DC,DC,6,7,1 555,1 555,B,B,DG,DG,3,2,1 555,1 555,1
type: ndb struct na base pair step
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
ndb struct na base pair step.i label asym id 1: A
ndb struct na base pair step.i label asym id 2: A
ndb struct na base pair step.i label comp id 1: DC
ndb struct na base pair step.i label comp id 2: DC
ndb struct na base pair step.i label seq id 1: 6
ndb struct na base pair step.i label seq id 2: 7
ndb struct na base pair step.i symmetry 1: 1_555
ndb struct na base pair step.i symmetry 2: 1_555
ndb struct na base pair step.j label asym id 1: B
ndb struct na base pair step.j label asym id 2: B
ndb struct na base pair step.j label comp id 1: DG
ndb struct na base pair step.j label comp id 2: DG
ndb struct na base pair step.j label seq id 1: 3
ndb struct na base pair step.j label seq id 2: 2
ndb struct na base pair step.j symmetry 1: 1_555
ndb struct na base pair step.j symmetry 2: 1_555
ndb struct na base pair step.model number: 1
ndb struct na base pair step.helical rise: 3.552
ndb struct na base pair step.helical twist: 38.195
ndb struct na base pair step.i auth asym id 1: A
ndb struct na base pair step.i auth asym id 2: A
ndb struct na base pair step.i auth seq id 1: 6
ndb struct na base pair step.i auth seq id 2: 7
ndb struct na base pair step.inclination: 2.777
ndb struct na base pair step.j auth asym id 1: B
ndb struct na base pair step.j auth asym id 2: B
ndb struct na base pair step.j auth seq id 1: 11
ndb struct na base pair step.j auth seq id 2: 10
ndb struct na base pair step.rise: 3.605
ndb struct na base pair step.roll: 1.816
ndb struct na base pair step.shift: 0.246
ndb struct na base pair step.slide: -0.759
ndb struct na base pair step.step name: AA_DC6DC7:DG10DG11_BB
ndb struct na base pair step.step number: 6
ndb struct na base pair step.tilt: -1.849
ndb struct na base pair step.tip: 2.828
ndb struct na base pair step.twist: 38.11
ndb struct na base pair step.x displacement: -1.41
ndb struct na base pair step.y displacement: -0.632

A,A,DC,DT,7,8,1 555,1 555,B,B,DG,DA,2,1,1 555,1 555,1
type: ndb struct na base pair step
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
ndb struct na base pair step.i label asym id 1: A
ndb struct na base pair step.i label asym id 2: A
ndb struct na base pair step.i label comp id 1: DC
ndb struct na base pair step.i label comp id 2: DT
ndb struct na base pair step.i label seq id 1: 7
ndb struct na base pair step.i label seq id 2: 8
ndb struct na base pair step.i symmetry 1: 1_555
ndb struct na base pair step.i symmetry 2: 1_555
ndb struct na base pair step.j label asym id 1: B
ndb struct na base pair step.j label asym id 2: B
ndb struct na base pair step.j label comp id 1: DG
ndb struct na base pair step.j label comp id 2: DA
ndb struct na base pair step.j label seq id 1: 2
ndb struct na base pair step.j label seq id 2: 1
ndb struct na base pair step.j symmetry 1: 1_555
ndb struct na base pair step.j symmetry 2: 1_555
ndb struct na base pair step.model number: 1
ndb struct na base pair step.helical rise: 2.977
ndb struct na base pair step.helical twist: 23.878
ndb struct na base pair step.i auth asym id 1: A
ndb struct na base pair step.i auth asym id 2: A
ndb struct na base pair step.i auth seq id 1: 7
ndb struct na base pair step.i auth seq id 2: 8
ndb struct na base pair step.inclination: 1.392
ndb struct na base pair step.j auth asym id 1: B
ndb struct na base pair step.j auth asym id 2: B
ndb struct na base pair step.j auth seq id 1: 10
ndb struct na base pair step.j auth seq id 2: 9
ndb struct na base pair step.rise: 3.073
ndb struct na base pair step.roll: 0.573
ndb struct na base pair step.shift: -0.295
ndb struct na base pair step.slide: 0.351
ndb struct na base pair step.step name: AA_DC7DT8:DA9DG10_BB
ndb struct na base pair step.step number: 7
ndb struct na base pair step.tilt: 4.356
ndb struct na base pair step.tip: -10.587
ndb struct na base pair step.twist: 23.476
ndb struct na base pair step.x displacement: 0.673
ndb struct na base pair step.y displacement: 2.038

Structure model,1,3
type: pdbx audit revision category
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to pdbx audit revision history: Structure model,3
pdbx audit revision category.data content type: Structure model
pdbx audit revision category.ordinal: 1
pdbx audit revision category.revision ordinal: 3
pdbx audit revision category.category: database_2

Structure model,3
referenced by pdbx audit revision category: Structure model,1,3
referenced by pdbx audit revision category: Structure model,2,3
referenced by pdbx audit revision category: Structure model,3,3
referenced by pdbx audit revision category: Structure model,4,3
referenced by pdbx audit revision category: Structure model,5,3
referenced by pdbx audit revision category: Structure model,6,3
referenced by pdbx audit revision category: Structure model,7,3
referenced by pdbx audit revision group: Structure model,2,3
referenced by pdbx audit revision group: Structure model,3,3
referenced by pdbx audit revision group: Structure model,4,3
type: pdbx audit revision history
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx audit revision history.data content type: Structure model
pdbx audit revision history.ordinal: 3
pdbx audit revision history.major revision: 1
pdbx audit revision history.minor revision: 2
pdbx audit revision history.revision date: 2022-03-16
referenced by pdbx audit revision item: Structure model,22,3
referenced by pdbx audit revision item: Structure model,1,3
referenced by pdbx audit revision item: Structure model,2,3
referenced by pdbx audit revision item: Structure model,3,3
referenced by pdbx audit revision item: Structure model,4,3
referenced by pdbx audit revision item: Structure model,5,3
referenced by pdbx audit revision item: Structure model,6,3
referenced by pdbx audit revision item: Structure model,7,3
referenced by pdbx audit revision item: Structure model,8,3
referenced by pdbx audit revision item: Structure model,9,3
referenced by pdbx audit revision item: Structure model,10,3
referenced by pdbx audit revision item: Structure model,11,3
referenced by pdbx audit revision item: Structure model,12,3
referenced by pdbx audit revision item: Structure model,13,3
referenced by pdbx audit revision item: Structure model,14,3
referenced by pdbx audit revision item: Structure model,15,3
referenced by pdbx audit revision item: Structure model,16,3
referenced by pdbx audit revision item: Structure model,17,3
referenced by pdbx audit revision item: Structure model,18,3
referenced by pdbx audit revision item: Structure model,19,3
referenced by pdbx audit revision item: Structure model,20,3
referenced by pdbx audit revision item: Structure model,21,3

Structure model,2,3
type: pdbx audit revision category
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to pdbx audit revision history: Structure model,3
pdbx audit revision category.data content type: Structure model
pdbx audit revision category.ordinal: 2
pdbx audit revision category.revision ordinal: 3
pdbx audit revision category.category: pdbx_nmr_software

Structure model,3,3
type: pdbx audit revision category
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to pdbx audit revision history: Structure model,3
pdbx audit revision category.data content type: Structure model
pdbx audit revision category.ordinal: 3
pdbx audit revision category.revision ordinal: 3
pdbx audit revision category.category: pdbx_nmr_spectrometer

Structure model,4,3
type: pdbx audit revision category
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to pdbx audit revision history: Structure model,3
pdbx audit revision category.data content type: Structure model
pdbx audit revision category.ordinal: 4
pdbx audit revision category.revision ordinal: 3
pdbx audit revision category.category: pdbx_struct_assembly

Structure model,5,3
type: pdbx audit revision category
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to pdbx audit revision history: Structure model,3
pdbx audit revision category.data content type: Structure model
pdbx audit revision category.ordinal: 5
pdbx audit revision category.revision ordinal: 3
pdbx audit revision category.category: pdbx_struct_oper_list

Structure model,6,3
type: pdbx audit revision category
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to pdbx audit revision history: Structure model,3
pdbx audit revision category.data content type: Structure model
pdbx audit revision category.ordinal: 6
pdbx audit revision category.revision ordinal: 3
pdbx audit revision category.category: struct_conn

Structure model,7,3
type: pdbx audit revision category
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to pdbx audit revision history: Structure model,3
pdbx audit revision category.data content type: Structure model
pdbx audit revision category.ordinal: 7
pdbx audit revision category.revision ordinal: 3
pdbx audit revision category.category: struct_site

Structure model,1,1
type: pdbx audit revision details
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to pdbx audit revision history: Structure model,1
pdbx audit revision details.data content type: Structure model
pdbx audit revision details.ordinal: 1
pdbx audit revision details.revision ordinal: 1
pdbx audit revision details.provider: repository
pdbx audit revision details.type: Initial release

Structure model,1
referenced by pdbx audit revision details: Structure model,1,1
type: pdbx audit revision history
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx audit revision history.data content type: Structure model
pdbx audit revision history.ordinal: 1
pdbx audit revision history.major revision: 1
pdbx audit revision history.minor revision: 0
pdbx audit revision history.revision date: 2009-09-29

Structure model,1,2
type: pdbx audit revision group
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to pdbx audit revision history: Structure model,2
pdbx audit revision group.data content type: Structure model
pdbx audit revision group.ordinal: 1
pdbx audit revision group.revision ordinal: 2
pdbx audit revision group.group: Version format compliance

Structure model,2
referenced by pdbx audit revision group: Structure model,1,2
type: pdbx audit revision history
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx audit revision history.data content type: Structure model
pdbx audit revision history.ordinal: 2
pdbx audit revision history.major revision: 1
pdbx audit revision history.minor revision: 1
pdbx audit revision history.revision date: 2011-07-13

Structure model,2,3
type: pdbx audit revision group
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to pdbx audit revision history: Structure model,3
pdbx audit revision group.data content type: Structure model
pdbx audit revision group.ordinal: 2
pdbx audit revision group.revision ordinal: 3
pdbx audit revision group.group: Data collection

Structure model,3,3
type: pdbx audit revision group
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to pdbx audit revision history: Structure model,3
pdbx audit revision group.data content type: Structure model
pdbx audit revision group.ordinal: 3
pdbx audit revision group.revision ordinal: 3
pdbx audit revision group.group: Database references

Structure model,4,3
type: pdbx audit revision group
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to pdbx audit revision history: Structure model,3
pdbx audit revision group.data content type: Structure model
pdbx audit revision group.ordinal: 4
pdbx audit revision group.revision ordinal: 3
pdbx audit revision group.group: Derived calculations

Structure model,1,3
type: pdbx audit revision item
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to pdbx audit revision history: Structure model,3
pdbx audit revision item.data content type: Structure model
pdbx audit revision item.ordinal: 1
pdbx audit revision item.revision ordinal: 3
pdbx audit revision item.item: _database_2.pdbx_DOI

Structure model,2,3
type: pdbx audit revision item
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to pdbx audit revision history: Structure model,3
pdbx audit revision item.data content type: Structure model
pdbx audit revision item.ordinal: 2
pdbx audit revision item.revision ordinal: 3
pdbx audit revision item.item: _database_2.pdbx_database_accession

Structure model,3,3
type: pdbx audit revision item
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to pdbx audit revision history: Structure model,3
pdbx audit revision item.data content type: Structure model
pdbx audit revision item.ordinal: 3
pdbx audit revision item.revision ordinal: 3
pdbx audit revision item.item: _pdbx_nmr_software.name

Structure model,4,3
type: pdbx audit revision item
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to pdbx audit revision history: Structure model,3
pdbx audit revision item.data content type: Structure model
pdbx audit revision item.ordinal: 4
pdbx audit revision item.revision ordinal: 3
pdbx audit revision item.item: _pdbx_nmr_spectrometer.model

Structure model,5,3
type: pdbx audit revision item
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to pdbx audit revision history: Structure model,3
pdbx audit revision item.data content type: Structure model
pdbx audit revision item.ordinal: 5
pdbx audit revision item.revision ordinal: 3
pdbx audit revision item.item: _struct_conn.pdbx_leaving_atom_flag

Structure model,6,3
type: pdbx audit revision item
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to pdbx audit revision history: Structure model,3
pdbx audit revision item.data content type: Structure model
pdbx audit revision item.ordinal: 6
pdbx audit revision item.revision ordinal: 3
pdbx audit revision item.item: _struct_conn.ptnr1_auth_asym_id

Structure model,7,3
type: pdbx audit revision item
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to pdbx audit revision history: Structure model,3
pdbx audit revision item.data content type: Structure model
pdbx audit revision item.ordinal: 7
pdbx audit revision item.revision ordinal: 3
pdbx audit revision item.item: _struct_conn.ptnr1_auth_comp_id

Structure model,8,3
type: pdbx audit revision item
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to pdbx audit revision history: Structure model,3
pdbx audit revision item.data content type: Structure model
pdbx audit revision item.ordinal: 8
pdbx audit revision item.revision ordinal: 3
pdbx audit revision item.item: _struct_conn.ptnr1_auth_seq_id

Structure model,9,3
type: pdbx audit revision item
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to pdbx audit revision history: Structure model,3
pdbx audit revision item.data content type: Structure model
pdbx audit revision item.ordinal: 9
pdbx audit revision item.revision ordinal: 3
pdbx audit revision item.item: _struct_conn.ptnr1_label_asym_id

Structure model,10,3
type: pdbx audit revision item
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to pdbx audit revision history: Structure model,3
pdbx audit revision item.data content type: Structure model
pdbx audit revision item.ordinal: 10
pdbx audit revision item.revision ordinal: 3
pdbx audit revision item.item: _struct_conn.ptnr1_label_atom_id

Structure model,11,3
type: pdbx audit revision item
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to pdbx audit revision history: Structure model,3
pdbx audit revision item.data content type: Structure model
pdbx audit revision item.ordinal: 11
pdbx audit revision item.revision ordinal: 3
pdbx audit revision item.item: _struct_conn.ptnr1_label_comp_id

Structure model,12,3
type: pdbx audit revision item
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to pdbx audit revision history: Structure model,3
pdbx audit revision item.data content type: Structure model
pdbx audit revision item.ordinal: 12
pdbx audit revision item.revision ordinal: 3
pdbx audit revision item.item: _struct_conn.ptnr1_label_seq_id

Structure model,13,3
type: pdbx audit revision item
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to pdbx audit revision history: Structure model,3
pdbx audit revision item.data content type: Structure model
pdbx audit revision item.ordinal: 13
pdbx audit revision item.revision ordinal: 3
pdbx audit revision item.item: _struct_conn.ptnr2_auth_asym_id

Structure model,14,3
type: pdbx audit revision item
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to pdbx audit revision history: Structure model,3
pdbx audit revision item.data content type: Structure model
pdbx audit revision item.ordinal: 14
pdbx audit revision item.revision ordinal: 3
pdbx audit revision item.item: _struct_conn.ptnr2_auth_comp_id

Structure model,15,3
type: pdbx audit revision item
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to pdbx audit revision history: Structure model,3
pdbx audit revision item.data content type: Structure model
pdbx audit revision item.ordinal: 15
pdbx audit revision item.revision ordinal: 3
pdbx audit revision item.item: _struct_conn.ptnr2_auth_seq_id

Structure model,16,3
type: pdbx audit revision item
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to pdbx audit revision history: Structure model,3
pdbx audit revision item.data content type: Structure model
pdbx audit revision item.ordinal: 16
pdbx audit revision item.revision ordinal: 3
pdbx audit revision item.item: _struct_conn.ptnr2_label_asym_id

Structure model,17,3
type: pdbx audit revision item
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to pdbx audit revision history: Structure model,3
pdbx audit revision item.data content type: Structure model
pdbx audit revision item.ordinal: 17
pdbx audit revision item.revision ordinal: 3
pdbx audit revision item.item: _struct_conn.ptnr2_label_atom_id

Structure model,18,3
type: pdbx audit revision item
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to pdbx audit revision history: Structure model,3
pdbx audit revision item.data content type: Structure model
pdbx audit revision item.ordinal: 18
pdbx audit revision item.revision ordinal: 3
pdbx audit revision item.item: _struct_conn.ptnr2_label_comp_id

Structure model,19,3
type: pdbx audit revision item
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to pdbx audit revision history: Structure model,3
pdbx audit revision item.data content type: Structure model
pdbx audit revision item.ordinal: 19
pdbx audit revision item.revision ordinal: 3
pdbx audit revision item.item: _struct_conn.ptnr2_label_seq_id

Structure model,20,3
type: pdbx audit revision item
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to pdbx audit revision history: Structure model,3
pdbx audit revision item.data content type: Structure model
pdbx audit revision item.ordinal: 20
pdbx audit revision item.revision ordinal: 3
pdbx audit revision item.item: _struct_site.pdbx_auth_asym_id

Structure model,21,3
type: pdbx audit revision item
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to pdbx audit revision history: Structure model,3
pdbx audit revision item.data content type: Structure model
pdbx audit revision item.ordinal: 21
pdbx audit revision item.revision ordinal: 3
pdbx audit revision item.item: _struct_site.pdbx_auth_comp_id

Structure model,22,3
type: pdbx audit revision item
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to pdbx audit revision history: Structure model,3
pdbx audit revision item.data content type: Structure model
pdbx audit revision item.ordinal: 22
pdbx audit revision item.revision ordinal: 3
pdbx audit revision item.item: _struct_site.pdbx_auth_seq_id

unspecified,1HZ2,PDB
type: pdbx database related
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx database related.content type: unspecified
pdbx database related.db id: 1HZ2
pdbx database related.db name: PDB
pdbx database related.details: previously refined structure

unspecified,2KNL,PDB
type: pdbx database related
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx database related.content type: unspecified
pdbx database related.db id: 2KNL
pdbx database related.db name: PDB

2KNK
type: pdbx database status
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to entry: 2KNK
pdbx database status.entry id: 2KNK
pdbx database status.deposit site: BMRB
pdbx database status.pdb format compatible: Y
pdbx database status.process site: RCSB
pdbx database status.recvd initial deposition date: 2009-08-26
pdbx database status.status code: REL
pdbx database status.status code mr: REL

http://rdf.wwpdb.org/pdb/2KNK/pdbx_entity_nonpoly/2
type: pdbx entity nonpoly
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to entity: http://rdf.wwpdb.org/pdb/2KNK/entity/2
pdbx entity nonpoly.entity id: 2
pdbx entity nonpoly.comp id: TME
pdbx entity nonpoly.name: PROPANE

2KNK
type: pdbx nmr ensemble
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to entry: 2KNK
pdbx nmr ensemble.entry id: 2KNK
pdbx nmr ensemble.conformer selection criteria: back calculated data agree with experimental NOESY spectrum
pdbx nmr ensemble.conformers calculated total number: 20
pdbx nmr ensemble.conformers submitted total number: 1

1,1,1
type: pdbx nmr exptl
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx nmr exptl.conditions id: 1
pdbx nmr exptl.experiment id: 1
pdbx nmr exptl.solution id: 1
pdbx nmr exptl.type: 2D 1H-1H NOESY

DNA (5&#39;-D(*AP*GP*GP*CP*GP*CP*CP*T)-3&#39;),1
type: pdbx nmr exptl sample
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx nmr exptl sample.component: DNA (5'-D(*AP*GP*GP*CP*GP*CP*CP*T)-3')
pdbx nmr exptl sample.solution id: 1
pdbx nmr exptl sample.concentration: 2
pdbx nmr exptl sample.concentration units: mM

XLK,1
type: pdbx nmr exptl sample
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx nmr exptl sample.component: XLK
pdbx nmr exptl sample.solution id: 1
pdbx nmr exptl sample.concentration: 2
pdbx nmr exptl sample.concentration units: mM

http://rdf.wwpdb.org/pdb/2KNK/pdbx_nmr_exptl_sample_conditions/1
type: pdbx nmr exptl sample conditions
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx nmr exptl sample conditions.conditions id: 1
pdbx nmr exptl sample conditions.ionic strength: 100
pdbx nmr exptl sample conditions.p h: 7.1
pdbx nmr exptl sample conditions.pressure: ambient
pdbx nmr exptl sample conditions.temperature: 298
pdbx nmr exptl sample conditions.temperature units: K

2KNK,1
type: pdbx nmr refine
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to entry: 2KNK
pdbx nmr refine.entry id: 2KNK
pdbx nmr refine.software ordinal: 1
pdbx nmr refine.method: simulated annealing

2KNK
type: pdbx nmr representative
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to entry: 2KNK
pdbx nmr representative.entry id: 2KNK
pdbx nmr representative.conformer id: 1
pdbx nmr representative.selection criteria: closest to the average

http://rdf.wwpdb.org/pdb/2KNK/pdbx_nmr_sample_details/1
type: pdbx nmr sample details
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx nmr sample details.solution id: 1
pdbx nmr sample details.contents: 2 mM DNA (5'-D(*AP*GP*GP*CP*GP*CP*CP*T)-3'), 2 mM XLK, 90% H2O/10% D2O
pdbx nmr sample details.solvent system: 90% H2O/10% D2O

http://rdf.wwpdb.org/pdb/2KNK/pdbx_nmr_software/1
type: pdbx nmr software
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx nmr software.ordinal: 1
pdbx nmr software.authors: Case, D.A. et al.
pdbx nmr software.classification: refinement
pdbx nmr software.name: Amber

http://rdf.wwpdb.org/pdb/2KNK/pdbx_nmr_spectrometer/1
type: pdbx nmr spectrometer
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx nmr spectrometer.spectrometer id: 1
pdbx nmr spectrometer.field strength: 500
pdbx nmr spectrometer.manufacturer: Bruker
pdbx nmr spectrometer.model: AVANCE
pdbx nmr spectrometer.type: Bruker Avance

C,1
type: pdbx nonpoly scheme
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx nonpoly scheme.asym id: C
pdbx nonpoly scheme.ndb seq num: 1
pdbx nonpoly scheme.auth mon id: TME
pdbx nonpoly scheme.auth seq num: 17
pdbx nonpoly scheme.entity id: 2
pdbx nonpoly scheme.mon id: TME
pdbx nonpoly scheme.pdb mon id: TME
pdbx nonpoly scheme.pdb seq num: 17
pdbx nonpoly scheme.pdb strand id: A

A,1,DA,1
type: pdbx poly seq scheme
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to entity poly seq: 1,DA,1
reference to struct asym: http://rdf.wwpdb.org/pdb/2KNK/struct_asym/A
pdbx poly seq scheme.asym id: A
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: DA
pdbx poly seq scheme.seq id: 1
pdbx poly seq scheme.auth mon id: DA
pdbx poly seq scheme.auth seq num: 1
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 1
pdbx poly seq scheme.pdb mon id: DA
pdbx poly seq scheme.pdb seq num: 1
pdbx poly seq scheme.pdb strand id: A

http://rdf.wwpdb.org/pdb/2KNK/struct_asym/A
referenced by pdbx poly seq scheme: A,1,DA,1
referenced by pdbx poly seq scheme: A,1,DG,2
referenced by pdbx poly seq scheme: A,1,DG,3
referenced by pdbx poly seq scheme: A,1,DC,4
referenced by pdbx poly seq scheme: A,1,DG,5
referenced by pdbx poly seq scheme: A,1,DC,6
referenced by pdbx poly seq scheme: A,1,DC,7
referenced by pdbx poly seq scheme: A,1,DT,8
type: struct asym
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to entity: http://rdf.wwpdb.org/pdb/2KNK/entity/1
struct asym.id: A
struct asym.entity id: 1
struct asym.pdbx blank PDB chainid flag: N
struct asym.pdbx modified: N

A,1,DG,2
type: pdbx poly seq scheme
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to entity poly seq: 1,DG,2
reference to struct asym: http://rdf.wwpdb.org/pdb/2KNK/struct_asym/A
pdbx poly seq scheme.asym id: A
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: DG
pdbx poly seq scheme.seq id: 2
pdbx poly seq scheme.auth mon id: DG
pdbx poly seq scheme.auth seq num: 2
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 2
pdbx poly seq scheme.pdb mon id: DG
pdbx poly seq scheme.pdb seq num: 2
pdbx poly seq scheme.pdb strand id: A

A,1,DG,3
type: pdbx poly seq scheme
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to entity poly seq: 1,DG,3
reference to struct asym: http://rdf.wwpdb.org/pdb/2KNK/struct_asym/A
pdbx poly seq scheme.asym id: A
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: DG
pdbx poly seq scheme.seq id: 3
pdbx poly seq scheme.auth mon id: DG
pdbx poly seq scheme.auth seq num: 3
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 3
pdbx poly seq scheme.pdb mon id: DG
pdbx poly seq scheme.pdb seq num: 3
pdbx poly seq scheme.pdb strand id: A

A,1,DC,4
type: pdbx poly seq scheme
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to entity poly seq: 1,DC,4
reference to struct asym: http://rdf.wwpdb.org/pdb/2KNK/struct_asym/A
pdbx poly seq scheme.asym id: A
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: DC
pdbx poly seq scheme.seq id: 4
pdbx poly seq scheme.auth mon id: DC
pdbx poly seq scheme.auth seq num: 4
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 4
pdbx poly seq scheme.pdb mon id: DC
pdbx poly seq scheme.pdb seq num: 4
pdbx poly seq scheme.pdb strand id: A

A,1,DG,5
type: pdbx poly seq scheme
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to entity poly seq: 1,DG,5
reference to struct asym: http://rdf.wwpdb.org/pdb/2KNK/struct_asym/A
pdbx poly seq scheme.asym id: A
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: DG
pdbx poly seq scheme.seq id: 5
pdbx poly seq scheme.auth mon id: DG
pdbx poly seq scheme.auth seq num: 5
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 5
pdbx poly seq scheme.pdb mon id: DG
pdbx poly seq scheme.pdb seq num: 5
pdbx poly seq scheme.pdb strand id: A

A,1,DC,6
type: pdbx poly seq scheme
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to entity poly seq: 1,DC,6
reference to struct asym: http://rdf.wwpdb.org/pdb/2KNK/struct_asym/A
pdbx poly seq scheme.asym id: A
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: DC
pdbx poly seq scheme.seq id: 6
pdbx poly seq scheme.auth mon id: DC
pdbx poly seq scheme.auth seq num: 6
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 6
pdbx poly seq scheme.pdb mon id: DC
pdbx poly seq scheme.pdb seq num: 6
pdbx poly seq scheme.pdb strand id: A

A,1,DC,7
type: pdbx poly seq scheme
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to entity poly seq: 1,DC,7
reference to struct asym: http://rdf.wwpdb.org/pdb/2KNK/struct_asym/A
pdbx poly seq scheme.asym id: A
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: DC
pdbx poly seq scheme.seq id: 7
pdbx poly seq scheme.auth mon id: DC
pdbx poly seq scheme.auth seq num: 7
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 7
pdbx poly seq scheme.pdb mon id: DC
pdbx poly seq scheme.pdb seq num: 7
pdbx poly seq scheme.pdb strand id: A

A,1,DT,8
type: pdbx poly seq scheme
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to entity poly seq: 1,DT,8
reference to struct asym: http://rdf.wwpdb.org/pdb/2KNK/struct_asym/A
pdbx poly seq scheme.asym id: A
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: DT
pdbx poly seq scheme.seq id: 8
pdbx poly seq scheme.auth mon id: DT
pdbx poly seq scheme.auth seq num: 8
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 8
pdbx poly seq scheme.pdb mon id: DT
pdbx poly seq scheme.pdb seq num: 8
pdbx poly seq scheme.pdb strand id: A

B,1,DA,1
type: pdbx poly seq scheme
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to entity poly seq: 1,DA,1
reference to struct asym: http://rdf.wwpdb.org/pdb/2KNK/struct_asym/B
pdbx poly seq scheme.asym id: B
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: DA
pdbx poly seq scheme.seq id: 1
pdbx poly seq scheme.auth mon id: DA
pdbx poly seq scheme.auth seq num: 9
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 1
pdbx poly seq scheme.pdb mon id: DA
pdbx poly seq scheme.pdb seq num: 9
pdbx poly seq scheme.pdb strand id: B

http://rdf.wwpdb.org/pdb/2KNK/struct_asym/B
referenced by pdbx poly seq scheme: B,1,DA,1
referenced by pdbx poly seq scheme: B,1,DG,2
referenced by pdbx poly seq scheme: B,1,DG,3
referenced by pdbx poly seq scheme: B,1,DC,4
referenced by pdbx poly seq scheme: B,1,DG,5
referenced by pdbx poly seq scheme: B,1,DC,6
referenced by pdbx poly seq scheme: B,1,DC,7
referenced by pdbx poly seq scheme: B,1,DT,8
type: struct asym
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to entity: http://rdf.wwpdb.org/pdb/2KNK/entity/1
struct asym.id: B
struct asym.entity id: 1
struct asym.pdbx blank PDB chainid flag: N
struct asym.pdbx modified: N

B,1,DG,2
type: pdbx poly seq scheme
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to entity poly seq: 1,DG,2
reference to struct asym: http://rdf.wwpdb.org/pdb/2KNK/struct_asym/B
pdbx poly seq scheme.asym id: B
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: DG
pdbx poly seq scheme.seq id: 2
pdbx poly seq scheme.auth mon id: DG
pdbx poly seq scheme.auth seq num: 10
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 2
pdbx poly seq scheme.pdb mon id: DG
pdbx poly seq scheme.pdb seq num: 10
pdbx poly seq scheme.pdb strand id: B

B,1,DG,3
type: pdbx poly seq scheme
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to entity poly seq: 1,DG,3
reference to struct asym: http://rdf.wwpdb.org/pdb/2KNK/struct_asym/B
pdbx poly seq scheme.asym id: B
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: DG
pdbx poly seq scheme.seq id: 3
pdbx poly seq scheme.auth mon id: DG
pdbx poly seq scheme.auth seq num: 11
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 3
pdbx poly seq scheme.pdb mon id: DG
pdbx poly seq scheme.pdb seq num: 11
pdbx poly seq scheme.pdb strand id: B

B,1,DC,4
type: pdbx poly seq scheme
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to entity poly seq: 1,DC,4
reference to struct asym: http://rdf.wwpdb.org/pdb/2KNK/struct_asym/B
pdbx poly seq scheme.asym id: B
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: DC
pdbx poly seq scheme.seq id: 4
pdbx poly seq scheme.auth mon id: DC
pdbx poly seq scheme.auth seq num: 12
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 4
pdbx poly seq scheme.pdb mon id: DC
pdbx poly seq scheme.pdb seq num: 12
pdbx poly seq scheme.pdb strand id: B

B,1,DG,5
type: pdbx poly seq scheme
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to entity poly seq: 1,DG,5
reference to struct asym: http://rdf.wwpdb.org/pdb/2KNK/struct_asym/B
pdbx poly seq scheme.asym id: B
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: DG
pdbx poly seq scheme.seq id: 5
pdbx poly seq scheme.auth mon id: DG
pdbx poly seq scheme.auth seq num: 13
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 5
pdbx poly seq scheme.pdb mon id: DG
pdbx poly seq scheme.pdb seq num: 13
pdbx poly seq scheme.pdb strand id: B

B,1,DC,6
type: pdbx poly seq scheme
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to entity poly seq: 1,DC,6
reference to struct asym: http://rdf.wwpdb.org/pdb/2KNK/struct_asym/B
pdbx poly seq scheme.asym id: B
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: DC
pdbx poly seq scheme.seq id: 6
pdbx poly seq scheme.auth mon id: DC
pdbx poly seq scheme.auth seq num: 14
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 6
pdbx poly seq scheme.pdb mon id: DC
pdbx poly seq scheme.pdb seq num: 14
pdbx poly seq scheme.pdb strand id: B

B,1,DC,7
type: pdbx poly seq scheme
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to entity poly seq: 1,DC,7
reference to struct asym: http://rdf.wwpdb.org/pdb/2KNK/struct_asym/B
pdbx poly seq scheme.asym id: B
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: DC
pdbx poly seq scheme.seq id: 7
pdbx poly seq scheme.auth mon id: DC
pdbx poly seq scheme.auth seq num: 15
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 7
pdbx poly seq scheme.pdb mon id: DC
pdbx poly seq scheme.pdb seq num: 15
pdbx poly seq scheme.pdb strand id: B

B,1,DT,8
type: pdbx poly seq scheme
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to entity poly seq: 1,DT,8
reference to struct asym: http://rdf.wwpdb.org/pdb/2KNK/struct_asym/B
pdbx poly seq scheme.asym id: B
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: DT
pdbx poly seq scheme.seq id: 8
pdbx poly seq scheme.auth mon id: DT
pdbx poly seq scheme.auth seq num: 16
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 8
pdbx poly seq scheme.pdb mon id: DT
pdbx poly seq scheme.pdb seq num: 16
pdbx poly seq scheme.pdb strand id: B

http://rdf.wwpdb.org/pdb/2KNK/pdbx_struct_assembly/1
type: pdbx struct assembly
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx struct assembly.id: 1
pdbx struct assembly.details: author_defined_assembly
pdbx struct assembly.oligomeric count: 2
pdbx struct assembly.oligomeric details: dimeric
referenced by pdbx struct assembly gen: 1,A,B,C,1

1,A,B,C,1
type: pdbx struct assembly gen
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to pdbx struct assembly: http://rdf.wwpdb.org/pdb/2KNK/pdbx_struct_assembly/1
pdbx struct assembly gen.assembly id: 1
pdbx struct assembly gen.asym id list: A,B,C
pdbx struct assembly gen.oper expression: 1

http://rdf.wwpdb.org/pdb/2KNK/pdbx_struct_oper_list/1
type: pdbx struct oper list
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx struct oper list.id: 1
pdbx struct oper list.matrix11: 1
pdbx struct oper list.matrix12: 0
pdbx struct oper list.matrix13: 0
pdbx struct oper list.matrix21: 0
pdbx struct oper list.matrix22: 1
pdbx struct oper list.matrix23: 0
pdbx struct oper list.matrix31: 0
pdbx struct oper list.matrix32: 0
pdbx struct oper list.matrix33: 1
pdbx struct oper list.name: 1_555
pdbx struct oper list.symmetry operation: x,y,z
pdbx struct oper list.type: identity operation
pdbx struct oper list.vector1: 0
pdbx struct oper list.vector2: 0
pdbx struct oper list.vector3: 0

http://rdf.wwpdb.org/pdb/2KNK/pdbx_validate_planes/1
type: pdbx validate planes
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx validate planes.id: 1
pdbx validate planes.pdb model num: 1
pdbx validate planes.auth asym id: A
pdbx validate planes.auth comp id: DG
pdbx validate planes.auth seq id: 2
pdbx validate planes.rmsd: 0.054
pdbx validate planes.type: SIDE CHAIN

http://rdf.wwpdb.org/pdb/2KNK/pdbx_validate_planes/2
type: pdbx validate planes
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx validate planes.id: 2
pdbx validate planes.pdb model num: 1
pdbx validate planes.auth asym id: A
pdbx validate planes.auth comp id: DG
pdbx validate planes.auth seq id: 3
pdbx validate planes.rmsd: 0.087
pdbx validate planes.type: SIDE CHAIN

http://rdf.wwpdb.org/pdb/2KNK/pdbx_validate_planes/3
type: pdbx validate planes
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx validate planes.id: 3
pdbx validate planes.pdb model num: 1
pdbx validate planes.auth asym id: A
pdbx validate planes.auth comp id: DG
pdbx validate planes.auth seq id: 5
pdbx validate planes.rmsd: 0.08
pdbx validate planes.type: SIDE CHAIN

http://rdf.wwpdb.org/pdb/2KNK/pdbx_validate_planes/4
type: pdbx validate planes
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx validate planes.id: 4
pdbx validate planes.pdb model num: 1
pdbx validate planes.auth asym id: B
pdbx validate planes.auth comp id: DG
pdbx validate planes.auth seq id: 11
pdbx validate planes.rmsd: 0.084
pdbx validate planes.type: SIDE CHAIN

http://rdf.wwpdb.org/pdb/2KNK/pdbx_validate_planes/5
type: pdbx validate planes
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx validate planes.id: 5
pdbx validate planes.pdb model num: 1
pdbx validate planes.auth asym id: B
pdbx validate planes.auth comp id: DG
pdbx validate planes.auth seq id: 13
pdbx validate planes.rmsd: 0.076
pdbx validate planes.type: SIDE CHAIN

http://rdf.wwpdb.org/pdb/2KNK/pdbx_validate_planes/6
type: pdbx validate planes
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx validate planes.id: 6
pdbx validate planes.pdb model num: 1
pdbx validate planes.auth asym id: B
pdbx validate planes.auth comp id: DC
pdbx validate planes.auth seq id: 14
pdbx validate planes.rmsd: 0.068
pdbx validate planes.type: SIDE CHAIN

http://rdf.wwpdb.org/pdb/2KNK/pdbx_validate_rmsd_angle/1
type: pdbx validate rmsd angle
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx validate rmsd angle.id: 1
pdbx validate rmsd angle.pdb model num: 1
pdbx validate rmsd angle.angle deviation: 2.39
pdbx validate rmsd angle.angle standard deviation: 0.3
pdbx validate rmsd angle.angle target value: 108.3
pdbx validate rmsd angle.angle value: 110.69
pdbx validate rmsd angle.auth asym id 1: A
pdbx validate rmsd angle.auth asym id 2: A
pdbx validate rmsd angle.auth asym id 3: A
pdbx validate rmsd angle.auth atom id 1: O4'
pdbx validate rmsd angle.auth atom id 2: C1'
pdbx validate rmsd angle.auth atom id 3: N9
pdbx validate rmsd angle.auth comp id 1: DA
pdbx validate rmsd angle.auth comp id 2: DA
pdbx validate rmsd angle.auth comp id 3: DA
pdbx validate rmsd angle.auth seq id 1: 1
pdbx validate rmsd angle.auth seq id 2: 1
pdbx validate rmsd angle.auth seq id 3: 1
pdbx validate rmsd angle.linker flag: N

http://rdf.wwpdb.org/pdb/2KNK/pdbx_validate_rmsd_angle/2
type: pdbx validate rmsd angle
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx validate rmsd angle.id: 2
pdbx validate rmsd angle.pdb model num: 1
pdbx validate rmsd angle.angle deviation: -3.34
pdbx validate rmsd angle.angle standard deviation: 0.5
pdbx validate rmsd angle.angle target value: 117
pdbx validate rmsd angle.angle value: 113.66
pdbx validate rmsd angle.auth asym id 1: A
pdbx validate rmsd angle.auth asym id 2: A
pdbx validate rmsd angle.auth asym id 3: A
pdbx validate rmsd angle.auth atom id 1: C4
pdbx validate rmsd angle.auth atom id 2: C5
pdbx validate rmsd angle.auth atom id 3: C6
pdbx validate rmsd angle.auth comp id 1: DA
pdbx validate rmsd angle.auth comp id 2: DA
pdbx validate rmsd angle.auth comp id 3: DA
pdbx validate rmsd angle.auth seq id 1: 1
pdbx validate rmsd angle.auth seq id 2: 1
pdbx validate rmsd angle.auth seq id 3: 1
pdbx validate rmsd angle.linker flag: N

http://rdf.wwpdb.org/pdb/2KNK/pdbx_validate_rmsd_angle/3
type: pdbx validate rmsd angle
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx validate rmsd angle.id: 3
pdbx validate rmsd angle.pdb model num: 1
pdbx validate rmsd angle.angle deviation: 3.35
pdbx validate rmsd angle.angle standard deviation: 0.5
pdbx validate rmsd angle.angle target value: 117.7
pdbx validate rmsd angle.angle value: 121.05
pdbx validate rmsd angle.auth asym id 1: A
pdbx validate rmsd angle.auth asym id 2: A
pdbx validate rmsd angle.auth asym id 3: A
pdbx validate rmsd angle.auth atom id 1: C5
pdbx validate rmsd angle.auth atom id 2: C6
pdbx validate rmsd angle.auth atom id 3: N1
pdbx validate rmsd angle.auth comp id 1: DA
pdbx validate rmsd angle.auth comp id 2: DA
pdbx validate rmsd angle.auth comp id 3: DA
pdbx validate rmsd angle.auth seq id 1: 1
pdbx validate rmsd angle.auth seq id 2: 1
pdbx validate rmsd angle.auth seq id 3: 1
pdbx validate rmsd angle.linker flag: N

http://rdf.wwpdb.org/pdb/2KNK/pdbx_validate_rmsd_angle/4
type: pdbx validate rmsd angle
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx validate rmsd angle.id: 4
pdbx validate rmsd angle.pdb model num: 1
pdbx validate rmsd angle.angle deviation: -5.6
pdbx validate rmsd angle.angle standard deviation: 0.6
pdbx validate rmsd angle.angle target value: 118.6
pdbx validate rmsd angle.angle value: 113
pdbx validate rmsd angle.auth asym id 1: A
pdbx validate rmsd angle.auth asym id 2: A
pdbx validate rmsd angle.auth asym id 3: A
pdbx validate rmsd angle.auth atom id 1: N1
pdbx validate rmsd angle.auth atom id 2: C6
pdbx validate rmsd angle.auth atom id 3: N6
pdbx validate rmsd angle.auth comp id 1: DA
pdbx validate rmsd angle.auth comp id 2: DA
pdbx validate rmsd angle.auth comp id 3: DA
pdbx validate rmsd angle.auth seq id 1: 1
pdbx validate rmsd angle.auth seq id 2: 1
pdbx validate rmsd angle.auth seq id 3: 1
pdbx validate rmsd angle.linker flag: N

http://rdf.wwpdb.org/pdb/2KNK/pdbx_validate_rmsd_angle/5
type: pdbx validate rmsd angle
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx validate rmsd angle.id: 5
pdbx validate rmsd angle.pdb model num: 1
pdbx validate rmsd angle.angle deviation: 1.98
pdbx validate rmsd angle.angle standard deviation: 0.3
pdbx validate rmsd angle.angle target value: 108.3
pdbx validate rmsd angle.angle value: 110.28
pdbx validate rmsd angle.auth asym id 1: A
pdbx validate rmsd angle.auth asym id 2: A
pdbx validate rmsd angle.auth asym id 3: A
pdbx validate rmsd angle.auth atom id 1: O4'
pdbx validate rmsd angle.auth atom id 2: C1'
pdbx validate rmsd angle.auth atom id 3: N1
pdbx validate rmsd angle.auth comp id 1: DC
pdbx validate rmsd angle.auth comp id 2: DC
pdbx validate rmsd angle.auth comp id 3: DC
pdbx validate rmsd angle.auth seq id 1: 4
pdbx validate rmsd angle.auth seq id 2: 4
pdbx validate rmsd angle.auth seq id 3: 4
pdbx validate rmsd angle.linker flag: N

http://rdf.wwpdb.org/pdb/2KNK/pdbx_validate_rmsd_angle/6
type: pdbx validate rmsd angle
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx validate rmsd angle.id: 6
pdbx validate rmsd angle.pdb model num: 1
pdbx validate rmsd angle.angle deviation: -5.19
pdbx validate rmsd angle.angle standard deviation: 0.7
pdbx validate rmsd angle.angle target value: 121.9
pdbx validate rmsd angle.angle value: 116.71
pdbx validate rmsd angle.auth asym id 1: A
pdbx validate rmsd angle.auth asym id 2: A
pdbx validate rmsd angle.auth asym id 3: A
pdbx validate rmsd angle.auth atom id 1: N3
pdbx validate rmsd angle.auth atom id 2: C2
pdbx validate rmsd angle.auth atom id 3: O2
pdbx validate rmsd angle.auth comp id 1: DC
pdbx validate rmsd angle.auth comp id 2: DC
pdbx validate rmsd angle.auth comp id 3: DC
pdbx validate rmsd angle.auth seq id 1: 4
pdbx validate rmsd angle.auth seq id 2: 4
pdbx validate rmsd angle.auth seq id 3: 4
pdbx validate rmsd angle.linker flag: N

http://rdf.wwpdb.org/pdb/2KNK/pdbx_validate_rmsd_angle/7
type: pdbx validate rmsd angle
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx validate rmsd angle.id: 7
pdbx validate rmsd angle.pdb model num: 1
pdbx validate rmsd angle.angle deviation: 6.57
pdbx validate rmsd angle.angle standard deviation: 0.3
pdbx validate rmsd angle.angle target value: 108.3
pdbx validate rmsd angle.angle value: 114.87
pdbx validate rmsd angle.auth asym id 1: A
pdbx validate rmsd angle.auth asym id 2: A
pdbx validate rmsd angle.auth asym id 3: A
pdbx validate rmsd angle.auth atom id 1: O4'
pdbx validate rmsd angle.auth atom id 2: C1'
pdbx validate rmsd angle.auth atom id 3: N9
pdbx validate rmsd angle.auth comp id 1: DG
pdbx validate rmsd angle.auth comp id 2: DG
pdbx validate rmsd angle.auth comp id 3: DG
pdbx validate rmsd angle.auth seq id 1: 5
pdbx validate rmsd angle.auth seq id 2: 5
pdbx validate rmsd angle.auth seq id 3: 5
pdbx validate rmsd angle.linker flag: N

http://rdf.wwpdb.org/pdb/2KNK/pdbx_validate_rmsd_angle/8
type: pdbx validate rmsd angle
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx validate rmsd angle.id: 8
pdbx validate rmsd angle.pdb model num: 1
pdbx validate rmsd angle.angle deviation: -5.1
pdbx validate rmsd angle.angle standard deviation: 0.7
pdbx validate rmsd angle.angle target value: 121.9
pdbx validate rmsd angle.angle value: 116.8
pdbx validate rmsd angle.auth asym id 1: A
pdbx validate rmsd angle.auth asym id 2: A
pdbx validate rmsd angle.auth asym id 3: A
pdbx validate rmsd angle.auth atom id 1: N3
pdbx validate rmsd angle.auth atom id 2: C2
pdbx validate rmsd angle.auth atom id 3: O2
pdbx validate rmsd angle.auth comp id 1: DC
pdbx validate rmsd angle.auth comp id 2: DC
pdbx validate rmsd angle.auth comp id 3: DC
pdbx validate rmsd angle.auth seq id 1: 6
pdbx validate rmsd angle.auth seq id 2: 6
pdbx validate rmsd angle.auth seq id 3: 6
pdbx validate rmsd angle.linker flag: N

http://rdf.wwpdb.org/pdb/2KNK/pdbx_validate_rmsd_angle/9
type: pdbx validate rmsd angle
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx validate rmsd angle.id: 9
pdbx validate rmsd angle.pdb model num: 1
pdbx validate rmsd angle.angle deviation: -4.86
pdbx validate rmsd angle.angle standard deviation: 0.7
pdbx validate rmsd angle.angle target value: 121.9
pdbx validate rmsd angle.angle value: 117.04
pdbx validate rmsd angle.auth asym id 1: A
pdbx validate rmsd angle.auth asym id 2: A
pdbx validate rmsd angle.auth asym id 3: A
pdbx validate rmsd angle.auth atom id 1: N3
pdbx validate rmsd angle.auth atom id 2: C2
pdbx validate rmsd angle.auth atom id 3: O2
pdbx validate rmsd angle.auth comp id 1: DC
pdbx validate rmsd angle.auth comp id 2: DC
pdbx validate rmsd angle.auth comp id 3: DC
pdbx validate rmsd angle.auth seq id 1: 7
pdbx validate rmsd angle.auth seq id 2: 7
pdbx validate rmsd angle.auth seq id 3: 7
pdbx validate rmsd angle.linker flag: N

http://rdf.wwpdb.org/pdb/2KNK/pdbx_validate_rmsd_angle/10
type: pdbx validate rmsd angle
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx validate rmsd angle.id: 10
pdbx validate rmsd angle.pdb model num: 1
pdbx validate rmsd angle.angle deviation: -3.66
pdbx validate rmsd angle.angle standard deviation: 0.6
pdbx validate rmsd angle.angle target value: 122.9
pdbx validate rmsd angle.angle value: 119.24
pdbx validate rmsd angle.auth asym id 1: A
pdbx validate rmsd angle.auth asym id 2: A
pdbx validate rmsd angle.auth asym id 3: A
pdbx validate rmsd angle.auth atom id 1: C6
pdbx validate rmsd angle.auth atom id 2: C5
pdbx validate rmsd angle.auth atom id 3: C7
pdbx validate rmsd angle.auth comp id 1: DT
pdbx validate rmsd angle.auth comp id 2: DT
pdbx validate rmsd angle.auth comp id 3: DT
pdbx validate rmsd angle.auth seq id 1: 8
pdbx validate rmsd angle.auth seq id 2: 8
pdbx validate rmsd angle.auth seq id 3: 8
pdbx validate rmsd angle.linker flag: N

http://rdf.wwpdb.org/pdb/2KNK/pdbx_validate_rmsd_angle/11
type: pdbx validate rmsd angle
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx validate rmsd angle.id: 11
pdbx validate rmsd angle.pdb model num: 1
pdbx validate rmsd angle.angle deviation: 3.3
pdbx validate rmsd angle.angle standard deviation: 0.3
pdbx validate rmsd angle.angle target value: 108.3
pdbx validate rmsd angle.angle value: 111.6
pdbx validate rmsd angle.auth asym id 1: B
pdbx validate rmsd angle.auth asym id 2: B
pdbx validate rmsd angle.auth asym id 3: B
pdbx validate rmsd angle.auth atom id 1: O4'
pdbx validate rmsd angle.auth atom id 2: C1'
pdbx validate rmsd angle.auth atom id 3: N9
pdbx validate rmsd angle.auth comp id 1: DA
pdbx validate rmsd angle.auth comp id 2: DA
pdbx validate rmsd angle.auth comp id 3: DA
pdbx validate rmsd angle.auth seq id 1: 9
pdbx validate rmsd angle.auth seq id 2: 9
pdbx validate rmsd angle.auth seq id 3: 9
pdbx validate rmsd angle.linker flag: N

http://rdf.wwpdb.org/pdb/2KNK/pdbx_validate_rmsd_angle/12
type: pdbx validate rmsd angle
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx validate rmsd angle.id: 12
pdbx validate rmsd angle.pdb model num: 1
pdbx validate rmsd angle.angle deviation: -3.22
pdbx validate rmsd angle.angle standard deviation: 0.5
pdbx validate rmsd angle.angle target value: 117
pdbx validate rmsd angle.angle value: 113.78
pdbx validate rmsd angle.auth asym id 1: B
pdbx validate rmsd angle.auth asym id 2: B
pdbx validate rmsd angle.auth asym id 3: B
pdbx validate rmsd angle.auth atom id 1: C4
pdbx validate rmsd angle.auth atom id 2: C5
pdbx validate rmsd angle.auth atom id 3: C6
pdbx validate rmsd angle.auth comp id 1: DA
pdbx validate rmsd angle.auth comp id 2: DA
pdbx validate rmsd angle.auth comp id 3: DA
pdbx validate rmsd angle.auth seq id 1: 9
pdbx validate rmsd angle.auth seq id 2: 9
pdbx validate rmsd angle.auth seq id 3: 9
pdbx validate rmsd angle.linker flag: N

http://rdf.wwpdb.org/pdb/2KNK/pdbx_validate_rmsd_angle/13
type: pdbx validate rmsd angle
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx validate rmsd angle.id: 13
pdbx validate rmsd angle.pdb model num: 1
pdbx validate rmsd angle.angle deviation: 3.41
pdbx validate rmsd angle.angle standard deviation: 0.5
pdbx validate rmsd angle.angle target value: 117.7
pdbx validate rmsd angle.angle value: 121.11
pdbx validate rmsd angle.auth asym id 1: B
pdbx validate rmsd angle.auth asym id 2: B
pdbx validate rmsd angle.auth asym id 3: B
pdbx validate rmsd angle.auth atom id 1: C5
pdbx validate rmsd angle.auth atom id 2: C6
pdbx validate rmsd angle.auth atom id 3: N1
pdbx validate rmsd angle.auth comp id 1: DA
pdbx validate rmsd angle.auth comp id 2: DA
pdbx validate rmsd angle.auth comp id 3: DA
pdbx validate rmsd angle.auth seq id 1: 9
pdbx validate rmsd angle.auth seq id 2: 9
pdbx validate rmsd angle.auth seq id 3: 9
pdbx validate rmsd angle.linker flag: N

http://rdf.wwpdb.org/pdb/2KNK/pdbx_validate_rmsd_angle/14
type: pdbx validate rmsd angle
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx validate rmsd angle.id: 14
pdbx validate rmsd angle.pdb model num: 1
pdbx validate rmsd angle.angle deviation: -5.35
pdbx validate rmsd angle.angle standard deviation: 0.6
pdbx validate rmsd angle.angle target value: 118.6
pdbx validate rmsd angle.angle value: 113.25
pdbx validate rmsd angle.auth asym id 1: B
pdbx validate rmsd angle.auth asym id 2: B
pdbx validate rmsd angle.auth asym id 3: B
pdbx validate rmsd angle.auth atom id 1: N1
pdbx validate rmsd angle.auth atom id 2: C6
pdbx validate rmsd angle.auth atom id 3: N6
pdbx validate rmsd angle.auth comp id 1: DA
pdbx validate rmsd angle.auth comp id 2: DA
pdbx validate rmsd angle.auth comp id 3: DA
pdbx validate rmsd angle.auth seq id 1: 9
pdbx validate rmsd angle.auth seq id 2: 9
pdbx validate rmsd angle.auth seq id 3: 9
pdbx validate rmsd angle.linker flag: N

http://rdf.wwpdb.org/pdb/2KNK/pdbx_validate_rmsd_angle/15
type: pdbx validate rmsd angle
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx validate rmsd angle.id: 15
pdbx validate rmsd angle.pdb model num: 1
pdbx validate rmsd angle.angle deviation: 2.05
pdbx validate rmsd angle.angle standard deviation: 0.3
pdbx validate rmsd angle.angle target value: 108.3
pdbx validate rmsd angle.angle value: 110.35
pdbx validate rmsd angle.auth asym id 1: B
pdbx validate rmsd angle.auth asym id 2: B
pdbx validate rmsd angle.auth asym id 3: B
pdbx validate rmsd angle.auth atom id 1: O4'
pdbx validate rmsd angle.auth atom id 2: C1'
pdbx validate rmsd angle.auth atom id 3: N9
pdbx validate rmsd angle.auth comp id 1: DG
pdbx validate rmsd angle.auth comp id 2: DG
pdbx validate rmsd angle.auth comp id 3: DG
pdbx validate rmsd angle.auth seq id 1: 10
pdbx validate rmsd angle.auth seq id 2: 10
pdbx validate rmsd angle.auth seq id 3: 10
pdbx validate rmsd angle.linker flag: N

http://rdf.wwpdb.org/pdb/2KNK/pdbx_validate_rmsd_angle/16
type: pdbx validate rmsd angle
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx validate rmsd angle.id: 16
pdbx validate rmsd angle.pdb model num: 1
pdbx validate rmsd angle.angle deviation: -5.15
pdbx validate rmsd angle.angle standard deviation: 0.7
pdbx validate rmsd angle.angle target value: 121.9
pdbx validate rmsd angle.angle value: 116.75
pdbx validate rmsd angle.auth asym id 1: B
pdbx validate rmsd angle.auth asym id 2: B
pdbx validate rmsd angle.auth asym id 3: B
pdbx validate rmsd angle.auth atom id 1: N3
pdbx validate rmsd angle.auth atom id 2: C2
pdbx validate rmsd angle.auth atom id 3: O2
pdbx validate rmsd angle.auth comp id 1: DC
pdbx validate rmsd angle.auth comp id 2: DC
pdbx validate rmsd angle.auth comp id 3: DC
pdbx validate rmsd angle.auth seq id 1: 12
pdbx validate rmsd angle.auth seq id 2: 12
pdbx validate rmsd angle.auth seq id 3: 12
pdbx validate rmsd angle.linker flag: N

http://rdf.wwpdb.org/pdb/2KNK/pdbx_validate_rmsd_angle/17
type: pdbx validate rmsd angle
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx validate rmsd angle.id: 17
pdbx validate rmsd angle.pdb model num: 1
pdbx validate rmsd angle.angle deviation: 6.22
pdbx validate rmsd angle.angle standard deviation: 0.3
pdbx validate rmsd angle.angle target value: 108.3
pdbx validate rmsd angle.angle value: 114.52
pdbx validate rmsd angle.auth asym id 1: B
pdbx validate rmsd angle.auth asym id 2: B
pdbx validate rmsd angle.auth asym id 3: B
pdbx validate rmsd angle.auth atom id 1: O4'
pdbx validate rmsd angle.auth atom id 2: C1'
pdbx validate rmsd angle.auth atom id 3: N9
pdbx validate rmsd angle.auth comp id 1: DG
pdbx validate rmsd angle.auth comp id 2: DG
pdbx validate rmsd angle.auth comp id 3: DG
pdbx validate rmsd angle.auth seq id 1: 13
pdbx validate rmsd angle.auth seq id 2: 13
pdbx validate rmsd angle.auth seq id 3: 13
pdbx validate rmsd angle.linker flag: N

http://rdf.wwpdb.org/pdb/2KNK/pdbx_validate_rmsd_angle/18
type: pdbx validate rmsd angle
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx validate rmsd angle.id: 18
pdbx validate rmsd angle.pdb model num: 1
pdbx validate rmsd angle.angle deviation: 1.83
pdbx validate rmsd angle.angle standard deviation: 0.3
pdbx validate rmsd angle.angle target value: 108.3
pdbx validate rmsd angle.angle value: 110.13
pdbx validate rmsd angle.auth asym id 1: B
pdbx validate rmsd angle.auth asym id 2: B
pdbx validate rmsd angle.auth asym id 3: B
pdbx validate rmsd angle.auth atom id 1: O4'
pdbx validate rmsd angle.auth atom id 2: C1'
pdbx validate rmsd angle.auth atom id 3: N1
pdbx validate rmsd angle.auth comp id 1: DC
pdbx validate rmsd angle.auth comp id 2: DC
pdbx validate rmsd angle.auth comp id 3: DC
pdbx validate rmsd angle.auth seq id 1: 14
pdbx validate rmsd angle.auth seq id 2: 14
pdbx validate rmsd angle.auth seq id 3: 14
pdbx validate rmsd angle.linker flag: N

http://rdf.wwpdb.org/pdb/2KNK/pdbx_validate_rmsd_angle/19
type: pdbx validate rmsd angle
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx validate rmsd angle.id: 19
pdbx validate rmsd angle.pdb model num: 1
pdbx validate rmsd angle.angle deviation: -5.19
pdbx validate rmsd angle.angle standard deviation: 0.7
pdbx validate rmsd angle.angle target value: 121.9
pdbx validate rmsd angle.angle value: 116.71
pdbx validate rmsd angle.auth asym id 1: B
pdbx validate rmsd angle.auth asym id 2: B
pdbx validate rmsd angle.auth asym id 3: B
pdbx validate rmsd angle.auth atom id 1: N3
pdbx validate rmsd angle.auth atom id 2: C2
pdbx validate rmsd angle.auth atom id 3: O2
pdbx validate rmsd angle.auth comp id 1: DC
pdbx validate rmsd angle.auth comp id 2: DC
pdbx validate rmsd angle.auth comp id 3: DC
pdbx validate rmsd angle.auth seq id 1: 14
pdbx validate rmsd angle.auth seq id 2: 14
pdbx validate rmsd angle.auth seq id 3: 14
pdbx validate rmsd angle.linker flag: N

http://rdf.wwpdb.org/pdb/2KNK/pdbx_validate_rmsd_angle/20
type: pdbx validate rmsd angle
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
pdbx validate rmsd angle.id: 20
pdbx validate rmsd angle.pdb model num: 1
pdbx validate rmsd angle.angle deviation: -4.82
pdbx validate rmsd angle.angle standard deviation: 0.7
pdbx validate rmsd angle.angle target value: 121.9
pdbx validate rmsd angle.angle value: 117.08
pdbx validate rmsd angle.auth asym id 1: B
pdbx validate rmsd angle.auth asym id 2: B
pdbx validate rmsd angle.auth asym id 3: B
pdbx validate rmsd angle.auth atom id 1: N3
pdbx validate rmsd angle.auth atom id 2: C2
pdbx validate rmsd angle.auth atom id 3: O2
pdbx validate rmsd angle.auth comp id 1: DC
pdbx validate rmsd angle.auth comp id 2: DC
pdbx validate rmsd angle.auth comp id 3: DC
pdbx validate rmsd angle.auth seq id 1: 15
pdbx validate rmsd angle.auth seq id 2: 15
pdbx validate rmsd angle.auth seq id 3: 15
pdbx validate rmsd angle.linker flag: N

2KNK
type: struct
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to entry: 2KNK
struct.entry id: 2KNK
struct.title: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context

http://rdf.wwpdb.org/pdb/2KNK/struct_asym/C
type: struct asym
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to entity: http://rdf.wwpdb.org/pdb/2KNK/entity/2
struct asym.id: C
struct asym.entity id: 2
struct asym.pdbx blank PDB chainid flag: N
struct asym.pdbx modified: N

http://rdf.wwpdb.org/pdb/2KNK/struct_biol/1
type: struct biol
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
struct biol.id: 1

covale1
type: struct conn
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to struct conn type: covale
struct conn.id: covale1
struct conn.conn type id: covale
struct conn.pdbx dist value: 1.467
struct conn.pdbx leaving atom flag: none
struct conn.ptnr1 auth asym id: A
struct conn.ptnr1 auth comp id: DG
struct conn.ptnr1 auth seq id: 5
struct conn.ptnr1 label asym id: A
struct conn.ptnr1 label atom id: N2
struct conn.ptnr1 label comp id: DG
struct conn.ptnr1 label seq id: 5
struct conn.ptnr1 symmetry: 1_555
struct conn.ptnr2 auth asym id: A
struct conn.ptnr2 auth comp id: TME
struct conn.ptnr2 auth seq id: 17
struct conn.ptnr2 label asym id: C
struct conn.ptnr2 label atom id: C1
struct conn.ptnr2 label comp id: TME
struct conn.ptnr2 symmetry: 1_555

covale
referenced by struct conn: covale1
referenced by struct conn: covale2
type: struct conn type
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
struct conn type.id: covale

covale2
type: struct conn
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to struct conn type: covale
struct conn.id: covale2
struct conn.conn type id: covale
struct conn.pdbx dist value: 1.468
struct conn.pdbx leaving atom flag: none
struct conn.ptnr1 auth asym id: A
struct conn.ptnr1 auth comp id: TME
struct conn.ptnr1 auth seq id: 17
struct conn.ptnr1 label asym id: C
struct conn.ptnr1 label atom id: C3
struct conn.ptnr1 label comp id: TME
struct conn.ptnr1 symmetry: 1_555
struct conn.ptnr2 auth asym id: B
struct conn.ptnr2 auth comp id: DG
struct conn.ptnr2 auth seq id: 13
struct conn.ptnr2 label asym id: B
struct conn.ptnr2 label atom id: N2
struct conn.ptnr2 label comp id: DG
struct conn.ptnr2 label seq id: 5
struct conn.ptnr2 symmetry: 1_555

hydrog1
type: struct conn
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to struct conn type: hydrog
struct conn.id: hydrog1
struct conn.conn type id: hydrog
struct conn.details: WATSON-CRICK
struct conn.ptnr1 auth asym id: A
struct conn.ptnr1 auth comp id: DA
struct conn.ptnr1 auth seq id: 1
struct conn.ptnr1 label asym id: A
struct conn.ptnr1 label atom id: N1
struct conn.ptnr1 label comp id: DA
struct conn.ptnr1 label seq id: 1
struct conn.ptnr1 symmetry: 1_555
struct conn.ptnr2 auth asym id: B
struct conn.ptnr2 auth comp id: DT
struct conn.ptnr2 auth seq id: 16
struct conn.ptnr2 label asym id: B
struct conn.ptnr2 label atom id: N3
struct conn.ptnr2 label comp id: DT
struct conn.ptnr2 label seq id: 8
struct conn.ptnr2 symmetry: 1_555

hydrog
referenced by struct conn: hydrog1
referenced by struct conn: hydrog2
referenced by struct conn: hydrog3
referenced by struct conn: hydrog4
referenced by struct conn: hydrog5
referenced by struct conn: hydrog6
referenced by struct conn: hydrog7
referenced by struct conn: hydrog8
referenced by struct conn: hydrog9
referenced by struct conn: hydrog10
referenced by struct conn: hydrog11
referenced by struct conn: hydrog12
referenced by struct conn: hydrog13
referenced by struct conn: hydrog14
referenced by struct conn: hydrog15
referenced by struct conn: hydrog16
referenced by struct conn: hydrog17
referenced by struct conn: hydrog18
referenced by struct conn: hydrog19
referenced by struct conn: hydrog20
referenced by struct conn: hydrog21
referenced by struct conn: hydrog22
type: struct conn type
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
struct conn type.id: hydrog

hydrog2
type: struct conn
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to struct conn type: hydrog
struct conn.id: hydrog2
struct conn.conn type id: hydrog
struct conn.details: WATSON-CRICK
struct conn.ptnr1 auth asym id: A
struct conn.ptnr1 auth comp id: DA
struct conn.ptnr1 auth seq id: 1
struct conn.ptnr1 label asym id: A
struct conn.ptnr1 label atom id: N6
struct conn.ptnr1 label comp id: DA
struct conn.ptnr1 label seq id: 1
struct conn.ptnr1 symmetry: 1_555
struct conn.ptnr2 auth asym id: B
struct conn.ptnr2 auth comp id: DT
struct conn.ptnr2 auth seq id: 16
struct conn.ptnr2 label asym id: B
struct conn.ptnr2 label atom id: O4
struct conn.ptnr2 label comp id: DT
struct conn.ptnr2 label seq id: 8
struct conn.ptnr2 symmetry: 1_555

hydrog3
type: struct conn
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to struct conn type: hydrog
struct conn.id: hydrog3
struct conn.conn type id: hydrog
struct conn.details: WATSON-CRICK
struct conn.ptnr1 auth asym id: A
struct conn.ptnr1 auth comp id: DG
struct conn.ptnr1 auth seq id: 2
struct conn.ptnr1 label asym id: A
struct conn.ptnr1 label atom id: N1
struct conn.ptnr1 label comp id: DG
struct conn.ptnr1 label seq id: 2
struct conn.ptnr1 symmetry: 1_555
struct conn.ptnr2 auth asym id: B
struct conn.ptnr2 auth comp id: DC
struct conn.ptnr2 auth seq id: 15
struct conn.ptnr2 label asym id: B
struct conn.ptnr2 label atom id: N3
struct conn.ptnr2 label comp id: DC
struct conn.ptnr2 label seq id: 7
struct conn.ptnr2 symmetry: 1_555

hydrog4
type: struct conn
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to struct conn type: hydrog
struct conn.id: hydrog4
struct conn.conn type id: hydrog
struct conn.details: WATSON-CRICK
struct conn.ptnr1 auth asym id: A
struct conn.ptnr1 auth comp id: DG
struct conn.ptnr1 auth seq id: 2
struct conn.ptnr1 label asym id: A
struct conn.ptnr1 label atom id: N2
struct conn.ptnr1 label comp id: DG
struct conn.ptnr1 label seq id: 2
struct conn.ptnr1 symmetry: 1_555
struct conn.ptnr2 auth asym id: B
struct conn.ptnr2 auth comp id: DC
struct conn.ptnr2 auth seq id: 15
struct conn.ptnr2 label asym id: B
struct conn.ptnr2 label atom id: O2
struct conn.ptnr2 label comp id: DC
struct conn.ptnr2 label seq id: 7
struct conn.ptnr2 symmetry: 1_555

hydrog5
type: struct conn
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to struct conn type: hydrog
struct conn.id: hydrog5
struct conn.conn type id: hydrog
struct conn.details: WATSON-CRICK
struct conn.ptnr1 auth asym id: A
struct conn.ptnr1 auth comp id: DG
struct conn.ptnr1 auth seq id: 2
struct conn.ptnr1 label asym id: A
struct conn.ptnr1 label atom id: O6
struct conn.ptnr1 label comp id: DG
struct conn.ptnr1 label seq id: 2
struct conn.ptnr1 symmetry: 1_555
struct conn.ptnr2 auth asym id: B
struct conn.ptnr2 auth comp id: DC
struct conn.ptnr2 auth seq id: 15
struct conn.ptnr2 label asym id: B
struct conn.ptnr2 label atom id: N4
struct conn.ptnr2 label comp id: DC
struct conn.ptnr2 label seq id: 7
struct conn.ptnr2 symmetry: 1_555

hydrog6
type: struct conn
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to struct conn type: hydrog
struct conn.id: hydrog6
struct conn.conn type id: hydrog
struct conn.details: WATSON-CRICK
struct conn.ptnr1 auth asym id: A
struct conn.ptnr1 auth comp id: DG
struct conn.ptnr1 auth seq id: 3
struct conn.ptnr1 label asym id: A
struct conn.ptnr1 label atom id: N1
struct conn.ptnr1 label comp id: DG
struct conn.ptnr1 label seq id: 3
struct conn.ptnr1 symmetry: 1_555
struct conn.ptnr2 auth asym id: B
struct conn.ptnr2 auth comp id: DC
struct conn.ptnr2 auth seq id: 14
struct conn.ptnr2 label asym id: B
struct conn.ptnr2 label atom id: N3
struct conn.ptnr2 label comp id: DC
struct conn.ptnr2 label seq id: 6
struct conn.ptnr2 symmetry: 1_555

hydrog7
type: struct conn
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to struct conn type: hydrog
struct conn.id: hydrog7
struct conn.conn type id: hydrog
struct conn.details: WATSON-CRICK
struct conn.ptnr1 auth asym id: A
struct conn.ptnr1 auth comp id: DG
struct conn.ptnr1 auth seq id: 3
struct conn.ptnr1 label asym id: A
struct conn.ptnr1 label atom id: N2
struct conn.ptnr1 label comp id: DG
struct conn.ptnr1 label seq id: 3
struct conn.ptnr1 symmetry: 1_555
struct conn.ptnr2 auth asym id: B
struct conn.ptnr2 auth comp id: DC
struct conn.ptnr2 auth seq id: 14
struct conn.ptnr2 label asym id: B
struct conn.ptnr2 label atom id: O2
struct conn.ptnr2 label comp id: DC
struct conn.ptnr2 label seq id: 6
struct conn.ptnr2 symmetry: 1_555

hydrog8
type: struct conn
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to struct conn type: hydrog
struct conn.id: hydrog8
struct conn.conn type id: hydrog
struct conn.details: WATSON-CRICK
struct conn.ptnr1 auth asym id: A
struct conn.ptnr1 auth comp id: DG
struct conn.ptnr1 auth seq id: 3
struct conn.ptnr1 label asym id: A
struct conn.ptnr1 label atom id: O6
struct conn.ptnr1 label comp id: DG
struct conn.ptnr1 label seq id: 3
struct conn.ptnr1 symmetry: 1_555
struct conn.ptnr2 auth asym id: B
struct conn.ptnr2 auth comp id: DC
struct conn.ptnr2 auth seq id: 14
struct conn.ptnr2 label asym id: B
struct conn.ptnr2 label atom id: N4
struct conn.ptnr2 label comp id: DC
struct conn.ptnr2 label seq id: 6
struct conn.ptnr2 symmetry: 1_555

hydrog9
type: struct conn
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to struct conn type: hydrog
struct conn.id: hydrog9
struct conn.conn type id: hydrog
struct conn.details: WATSON-CRICK
struct conn.ptnr1 auth asym id: A
struct conn.ptnr1 auth comp id: DC
struct conn.ptnr1 auth seq id: 4
struct conn.ptnr1 label asym id: A
struct conn.ptnr1 label atom id: N3
struct conn.ptnr1 label comp id: DC
struct conn.ptnr1 label seq id: 4
struct conn.ptnr1 symmetry: 1_555
struct conn.ptnr2 auth asym id: B
struct conn.ptnr2 auth comp id: DG
struct conn.ptnr2 auth seq id: 13
struct conn.ptnr2 label asym id: B
struct conn.ptnr2 label atom id: N1
struct conn.ptnr2 label comp id: DG
struct conn.ptnr2 label seq id: 5
struct conn.ptnr2 symmetry: 1_555

hydrog10
type: struct conn
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to struct conn type: hydrog
struct conn.id: hydrog10
struct conn.conn type id: hydrog
struct conn.details: WATSON-CRICK
struct conn.ptnr1 auth asym id: A
struct conn.ptnr1 auth comp id: DC
struct conn.ptnr1 auth seq id: 4
struct conn.ptnr1 label asym id: A
struct conn.ptnr1 label atom id: N4
struct conn.ptnr1 label comp id: DC
struct conn.ptnr1 label seq id: 4
struct conn.ptnr1 symmetry: 1_555
struct conn.ptnr2 auth asym id: B
struct conn.ptnr2 auth comp id: DG
struct conn.ptnr2 auth seq id: 13
struct conn.ptnr2 label asym id: B
struct conn.ptnr2 label atom id: O6
struct conn.ptnr2 label comp id: DG
struct conn.ptnr2 label seq id: 5
struct conn.ptnr2 symmetry: 1_555

hydrog11
type: struct conn
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to struct conn type: hydrog
struct conn.id: hydrog11
struct conn.conn type id: hydrog
struct conn.details: WATSON-CRICK
struct conn.ptnr1 auth asym id: A
struct conn.ptnr1 auth comp id: DC
struct conn.ptnr1 auth seq id: 4
struct conn.ptnr1 label asym id: A
struct conn.ptnr1 label atom id: O2
struct conn.ptnr1 label comp id: DC
struct conn.ptnr1 label seq id: 4
struct conn.ptnr1 symmetry: 1_555
struct conn.ptnr2 auth asym id: B
struct conn.ptnr2 auth comp id: DG
struct conn.ptnr2 auth seq id: 13
struct conn.ptnr2 label asym id: B
struct conn.ptnr2 label atom id: N2
struct conn.ptnr2 label comp id: DG
struct conn.ptnr2 label seq id: 5
struct conn.ptnr2 symmetry: 1_555

hydrog12
type: struct conn
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to struct conn type: hydrog
struct conn.id: hydrog12
struct conn.conn type id: hydrog
struct conn.details: WATSON-CRICK
struct conn.ptnr1 auth asym id: A
struct conn.ptnr1 auth comp id: DG
struct conn.ptnr1 auth seq id: 5
struct conn.ptnr1 label asym id: A
struct conn.ptnr1 label atom id: N1
struct conn.ptnr1 label comp id: DG
struct conn.ptnr1 label seq id: 5
struct conn.ptnr1 symmetry: 1_555
struct conn.ptnr2 auth asym id: B
struct conn.ptnr2 auth comp id: DC
struct conn.ptnr2 auth seq id: 12
struct conn.ptnr2 label asym id: B
struct conn.ptnr2 label atom id: N3
struct conn.ptnr2 label comp id: DC
struct conn.ptnr2 label seq id: 4
struct conn.ptnr2 symmetry: 1_555

hydrog13
type: struct conn
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to struct conn type: hydrog
struct conn.id: hydrog13
struct conn.conn type id: hydrog
struct conn.details: WATSON-CRICK
struct conn.ptnr1 auth asym id: A
struct conn.ptnr1 auth comp id: DG
struct conn.ptnr1 auth seq id: 5
struct conn.ptnr1 label asym id: A
struct conn.ptnr1 label atom id: N2
struct conn.ptnr1 label comp id: DG
struct conn.ptnr1 label seq id: 5
struct conn.ptnr1 symmetry: 1_555
struct conn.ptnr2 auth asym id: B
struct conn.ptnr2 auth comp id: DC
struct conn.ptnr2 auth seq id: 12
struct conn.ptnr2 label asym id: B
struct conn.ptnr2 label atom id: O2
struct conn.ptnr2 label comp id: DC
struct conn.ptnr2 label seq id: 4
struct conn.ptnr2 symmetry: 1_555

hydrog14
type: struct conn
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to struct conn type: hydrog
struct conn.id: hydrog14
struct conn.conn type id: hydrog
struct conn.details: WATSON-CRICK
struct conn.ptnr1 auth asym id: A
struct conn.ptnr1 auth comp id: DG
struct conn.ptnr1 auth seq id: 5
struct conn.ptnr1 label asym id: A
struct conn.ptnr1 label atom id: O6
struct conn.ptnr1 label comp id: DG
struct conn.ptnr1 label seq id: 5
struct conn.ptnr1 symmetry: 1_555
struct conn.ptnr2 auth asym id: B
struct conn.ptnr2 auth comp id: DC
struct conn.ptnr2 auth seq id: 12
struct conn.ptnr2 label asym id: B
struct conn.ptnr2 label atom id: N4
struct conn.ptnr2 label comp id: DC
struct conn.ptnr2 label seq id: 4
struct conn.ptnr2 symmetry: 1_555

hydrog15
type: struct conn
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to struct conn type: hydrog
struct conn.id: hydrog15
struct conn.conn type id: hydrog
struct conn.details: WATSON-CRICK
struct conn.ptnr1 auth asym id: A
struct conn.ptnr1 auth comp id: DC
struct conn.ptnr1 auth seq id: 6
struct conn.ptnr1 label asym id: A
struct conn.ptnr1 label atom id: N3
struct conn.ptnr1 label comp id: DC
struct conn.ptnr1 label seq id: 6
struct conn.ptnr1 symmetry: 1_555
struct conn.ptnr2 auth asym id: B
struct conn.ptnr2 auth comp id: DG
struct conn.ptnr2 auth seq id: 11
struct conn.ptnr2 label asym id: B
struct conn.ptnr2 label atom id: N1
struct conn.ptnr2 label comp id: DG
struct conn.ptnr2 label seq id: 3
struct conn.ptnr2 symmetry: 1_555

hydrog16
type: struct conn
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to struct conn type: hydrog
struct conn.id: hydrog16
struct conn.conn type id: hydrog
struct conn.details: WATSON-CRICK
struct conn.ptnr1 auth asym id: A
struct conn.ptnr1 auth comp id: DC
struct conn.ptnr1 auth seq id: 6
struct conn.ptnr1 label asym id: A
struct conn.ptnr1 label atom id: N4
struct conn.ptnr1 label comp id: DC
struct conn.ptnr1 label seq id: 6
struct conn.ptnr1 symmetry: 1_555
struct conn.ptnr2 auth asym id: B
struct conn.ptnr2 auth comp id: DG
struct conn.ptnr2 auth seq id: 11
struct conn.ptnr2 label asym id: B
struct conn.ptnr2 label atom id: O6
struct conn.ptnr2 label comp id: DG
struct conn.ptnr2 label seq id: 3
struct conn.ptnr2 symmetry: 1_555

hydrog17
type: struct conn
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to struct conn type: hydrog
struct conn.id: hydrog17
struct conn.conn type id: hydrog
struct conn.details: WATSON-CRICK
struct conn.ptnr1 auth asym id: A
struct conn.ptnr1 auth comp id: DC
struct conn.ptnr1 auth seq id: 6
struct conn.ptnr1 label asym id: A
struct conn.ptnr1 label atom id: O2
struct conn.ptnr1 label comp id: DC
struct conn.ptnr1 label seq id: 6
struct conn.ptnr1 symmetry: 1_555
struct conn.ptnr2 auth asym id: B
struct conn.ptnr2 auth comp id: DG
struct conn.ptnr2 auth seq id: 11
struct conn.ptnr2 label asym id: B
struct conn.ptnr2 label atom id: N2
struct conn.ptnr2 label comp id: DG
struct conn.ptnr2 label seq id: 3
struct conn.ptnr2 symmetry: 1_555

hydrog18
type: struct conn
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to struct conn type: hydrog
struct conn.id: hydrog18
struct conn.conn type id: hydrog
struct conn.details: WATSON-CRICK
struct conn.ptnr1 auth asym id: A
struct conn.ptnr1 auth comp id: DC
struct conn.ptnr1 auth seq id: 7
struct conn.ptnr1 label asym id: A
struct conn.ptnr1 label atom id: N3
struct conn.ptnr1 label comp id: DC
struct conn.ptnr1 label seq id: 7
struct conn.ptnr1 symmetry: 1_555
struct conn.ptnr2 auth asym id: B
struct conn.ptnr2 auth comp id: DG
struct conn.ptnr2 auth seq id: 10
struct conn.ptnr2 label asym id: B
struct conn.ptnr2 label atom id: N1
struct conn.ptnr2 label comp id: DG
struct conn.ptnr2 label seq id: 2
struct conn.ptnr2 symmetry: 1_555

hydrog19
type: struct conn
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to struct conn type: hydrog
struct conn.id: hydrog19
struct conn.conn type id: hydrog
struct conn.details: WATSON-CRICK
struct conn.ptnr1 auth asym id: A
struct conn.ptnr1 auth comp id: DC
struct conn.ptnr1 auth seq id: 7
struct conn.ptnr1 label asym id: A
struct conn.ptnr1 label atom id: N4
struct conn.ptnr1 label comp id: DC
struct conn.ptnr1 label seq id: 7
struct conn.ptnr1 symmetry: 1_555
struct conn.ptnr2 auth asym id: B
struct conn.ptnr2 auth comp id: DG
struct conn.ptnr2 auth seq id: 10
struct conn.ptnr2 label asym id: B
struct conn.ptnr2 label atom id: O6
struct conn.ptnr2 label comp id: DG
struct conn.ptnr2 label seq id: 2
struct conn.ptnr2 symmetry: 1_555

hydrog20
type: struct conn
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to struct conn type: hydrog
struct conn.id: hydrog20
struct conn.conn type id: hydrog
struct conn.details: WATSON-CRICK
struct conn.ptnr1 auth asym id: A
struct conn.ptnr1 auth comp id: DC
struct conn.ptnr1 auth seq id: 7
struct conn.ptnr1 label asym id: A
struct conn.ptnr1 label atom id: O2
struct conn.ptnr1 label comp id: DC
struct conn.ptnr1 label seq id: 7
struct conn.ptnr1 symmetry: 1_555
struct conn.ptnr2 auth asym id: B
struct conn.ptnr2 auth comp id: DG
struct conn.ptnr2 auth seq id: 10
struct conn.ptnr2 label asym id: B
struct conn.ptnr2 label atom id: N2
struct conn.ptnr2 label comp id: DG
struct conn.ptnr2 label seq id: 2
struct conn.ptnr2 symmetry: 1_555

hydrog21
type: struct conn
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to struct conn type: hydrog
struct conn.id: hydrog21
struct conn.conn type id: hydrog
struct conn.details: WATSON-CRICK
struct conn.ptnr1 auth asym id: A
struct conn.ptnr1 auth comp id: DT
struct conn.ptnr1 auth seq id: 8
struct conn.ptnr1 label asym id: A
struct conn.ptnr1 label atom id: N3
struct conn.ptnr1 label comp id: DT
struct conn.ptnr1 label seq id: 8
struct conn.ptnr1 symmetry: 1_555
struct conn.ptnr2 auth asym id: B
struct conn.ptnr2 auth comp id: DA
struct conn.ptnr2 auth seq id: 9
struct conn.ptnr2 label asym id: B
struct conn.ptnr2 label atom id: N1
struct conn.ptnr2 label comp id: DA
struct conn.ptnr2 label seq id: 1
struct conn.ptnr2 symmetry: 1_555

hydrog22
type: struct conn
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to struct conn type: hydrog
struct conn.id: hydrog22
struct conn.conn type id: hydrog
struct conn.details: WATSON-CRICK
struct conn.ptnr1 auth asym id: A
struct conn.ptnr1 auth comp id: DT
struct conn.ptnr1 auth seq id: 8
struct conn.ptnr1 label asym id: A
struct conn.ptnr1 label atom id: O4
struct conn.ptnr1 label comp id: DT
struct conn.ptnr1 label seq id: 8
struct conn.ptnr1 symmetry: 1_555
struct conn.ptnr2 auth asym id: B
struct conn.ptnr2 auth comp id: DA
struct conn.ptnr2 auth seq id: 9
struct conn.ptnr2 label asym id: B
struct conn.ptnr2 label atom id: N6
struct conn.ptnr2 label comp id: DA
struct conn.ptnr2 label seq id: 1
struct conn.ptnr2 symmetry: 1_555

2KNK
type: struct keywords
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to entry: 2KNK
struct keywords.entry id: 2KNK
struct keywords.pdbx keywords: DNA
struct keywords.text: interstrand cross-link, trimethylene, CpG sequence context, DNA

http://rdf.wwpdb.org/pdb/2KNK/struct_ref/1
type: struct ref
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to entity: http://rdf.wwpdb.org/pdb/2KNK/entity/1
struct ref.id: 1
struct ref.db code: 2KNK
struct ref.db name: PDB
struct ref.entity id: 1
struct ref.pdbx db accession: 2KNK
referenced by struct ref seq: http://rdf.wwpdb.org/pdb/2KNK/struct_ref_seq/2
referenced by struct ref seq: http://rdf.wwpdb.org/pdb/2KNK/struct_ref_seq/1

http://rdf.wwpdb.org/pdb/2KNK/struct_ref_seq/1
type: struct ref seq
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to struct ref: http://rdf.wwpdb.org/pdb/2KNK/struct_ref/1
struct ref seq.align id: 1
struct ref seq.db align beg: 1
struct ref seq.db align end: 8
struct ref seq.pdbx PDB id code: 2KNK
struct ref seq.pdbx auth seq align beg: 1
struct ref seq.pdbx auth seq align end: 8
struct ref seq.pdbx db accession: 2KNK
struct ref seq.pdbx strand id: A
struct ref seq.ref id: 1
struct ref seq.seq align beg: 1
struct ref seq.seq align end: 8

http://rdf.wwpdb.org/pdb/2KNK/struct_ref_seq/2
type: struct ref seq
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to struct ref: http://rdf.wwpdb.org/pdb/2KNK/struct_ref/1
struct ref seq.align id: 2
struct ref seq.db align beg: 9
struct ref seq.db align end: 16
struct ref seq.pdbx PDB id code: 2KNK
struct ref seq.pdbx auth seq align beg: 9
struct ref seq.pdbx auth seq align end: 16
struct ref seq.pdbx db accession: 2KNK
struct ref seq.pdbx strand id: B
struct ref seq.ref id: 1
struct ref seq.seq align beg: 1
struct ref seq.seq align end: 8

AC1
type: struct site
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
struct site.id: AC1
struct site.details: BINDING SITE FOR RESIDUE TME A 17
struct site.pdbx auth asym id: A
struct site.pdbx auth comp id: TME
struct site.pdbx auth seq id: 17
struct site.pdbx evidence code: Software
struct site.pdbx num residues: 2
referenced by struct site gen: 2,AC1
referenced by struct site gen: 1,AC1

1,AC1
type: struct site gen
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to struct site: AC1
struct site gen.id: 1
struct site gen.site id: AC1
struct site gen.auth asym id: A
struct site gen.auth comp id: DG
struct site gen.auth seq id: 5
struct site gen.label asym id: A
struct site gen.label comp id: DG
struct site gen.label seq id: 5
struct site gen.pdbx num res: 2
struct site gen.symmetry: 1_555

2,AC1
type: struct site gen
of datablock: Structure of the trimethylene N2-dG:N2-dG interstrand cross-link in 5'-CpG-3' sequence context
reference to struct site: AC1
struct site gen.id: 2
struct site gen.site id: AC1
struct site gen.auth asym id: B
struct site gen.auth comp id: DG
struct site gen.auth seq id: 13
struct site gen.label asym id: B
struct site gen.label comp id: DG
struct site gen.label seq id: 5
struct site gen.pdbx num res: 2
struct site gen.symmetry: 1_555