A parallel stranded DNA duplex with an A-G mismatch base-pair
2'-DEOXY-N3-PROTONATED CYTIDINE-5'-MONOPHOSPHATE
A parallel stranded DNA duplex with an A-G mismatch base-pair: (CCATAATTTACC:CCTATGAAATCC)
DNA (5'-D(P*(DNR)P*(DNR)P*DAP*DTP*DAP*DAP*DTP*DTP*DTP*DAP*(DNR)P*(DNR))-3')
NMR Structure Of A Parallel Stranded DNA Duplex At Atomic Resolution
the DNA duplex was synthesized with an applied biosystems model 380b DNA synthesizer using solid state phosphoramidate chemistry.
This structure was determined using 2D homonuclear techniques
energy minimized using the NMR constraints
THE RESULTING STRUCTURE WAS ENERGY MINIMIZED USING THE NMR CONSTRAINTS
From the structure 1JUU, the required T base was replaced by G using insightII.
5 mM concentration of each strand to form the duplex
0.05 M deuterated sodium acetate buffer and 0.1 M NaCl pH 5.5 and 6.8
ps-DNA, A:G mismatch, parallel DNA duplex, DNA